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    Pros1 protein S (alpha) [ Mus musculus (house mouse) ]

    Gene ID: 19128, updated on 27-Nov-2024

    Summary

    Official Symbol
    Pros1provided by MGI
    Official Full Name
    protein S (alpha)provided by MGI
    Primary source
    MGI:MGI:1095733
    See related
    Ensembl:ENSMUSG00000022912 AllianceGenome:MGI:1095733
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    This gene encodes a vitamin K-dependent protein with key roles in multiple biological processes including coagulation, apoptosis and vasculogenesis. The encoded protein undergoes proteolytic processing to generate a mature protein which is secreted into the plasma. Mice lacking the encoded protein die in utero from a fulminant coagulopathy and associated hemorrhages. [provided by RefSeq, Oct 2015]
    Expression
    Ubiquitous expression in placenta adult (RPKM 16.0), bladder adult (RPKM 11.9) and 27 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Pros1 in Genome Data Viewer
    Location:
    16 C1.3; 16 36.43 cM
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (62674670..62749709)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (62854307..62929346)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_41128 Neighboring gene NOL1/NOP2/Sun domain family member 3 Neighboring gene predicted gene, 52231 Neighboring gene STARR-positive B cell enhancer ABC_E7471 Neighboring gene ADP-ribosylation factor-like 13B Neighboring gene syntaxin 19 Neighboring gene CapStarr-seq enhancer MGSCv37_chr16:62846895-62847078 Neighboring gene STARR-seq mESC enhancer starr_41130 Neighboring gene STARR-seq mESC enhancer starr_41131 Neighboring gene STARR-positive B cell enhancer mm9_chr16:62940376-62940676 Neighboring gene STARR-seq mESC enhancer starr_41132 Neighboring gene predicted gene, 53931 Neighboring gene zinc finger and SCAN domain containing 5B pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (6)  1 citation

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein-containing complex binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in blood coagulation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in fibrinolysis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of coagulation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of phagocytosis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in extracellular space HDA PubMed 
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     
    part_of protein-containing complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    vitamin K-dependent protein S

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_011173.3NP_035303.1  vitamin K-dependent protein S preproprotein

      See identical proteins and their annotated locations for NP_035303.1

      Status: REVIEWED

      Source sequence(s)
      AK145501, AK163032, BE949628
      Consensus CDS
      CCDS28263.1
      UniProtKB/Swiss-Prot
      P43483, Q08761
      UniProtKB/TrEMBL
      Q3TR66
      Related
      ENSMUSP00000023629.9, ENSMUST00000023629.9
      Conserved Domains (6) summary
      smart00069
      Location:2385
      GLA; Domain containing Gla (gamma-carboxyglutamate) residues
      pfam00054
      Location:329459
      Laminin_G_1; Laminin G domain
      pfam06247
      Location:134287
      Plasmod_Pvs28; Plasmodium ookinete surface protein Pvs28
      pfam07645
      Location:201241
      EGF_CA; Calcium-binding EGF domain
      pfam14670
      Location:165199
      FXa_inhibition; Coagulation Factor Xa inhibitory site
      cl22861
      Location:514646
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      62674670..62749709
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011245843.4XP_011244145.1  vitamin K-dependent protein S isoform X1

      Conserved Domains (5) summary
      pfam07645
      Location:121161
      EGF_CA; Calcium-binding EGF domain
      pfam00008
      Location:4173
      EGF; EGF-like domain
      pfam00054
      Location:249379
      Laminin_G_1; Laminin G domain
      pfam14670
      Location:85119
      FXa_inhibition; Coagulation Factor Xa inhibitory site
      cl22861
      Location:429566
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...