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    Ear6 eosinophil-associated, ribonuclease A family, member 6 [ Mus musculus (house mouse) ]

    Gene ID: 93719, updated on 9-Dec-2024

    Summary

    Official Symbol
    Ear6provided by MGI
    Official Full Name
    eosinophil-associated, ribonuclease A family, member 6provided by MGI
    Primary source
    MGI:MGI:1890463
    See related
    Ensembl:ENSMUSG00000062148 AllianceGenome:MGI:1890463
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Enables RNA nuclease activity. Predicted to be involved in chemotaxis; defense response to Gram-positive bacterium; and innate immune response in mucosa. Predicted to be active in extracellular space. Orthologous to human RNASE2 (ribonuclease A family member 2) and RNASE3 (ribonuclease A family member 3). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in liver E18 (RPKM 21.2), liver E14 (RPKM 12.5) and 2 other tissues See more
    Orthologs
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    Genomic context

    See Ear6 in Genome Data Viewer
    Location:
    14 C2; 14 26.7 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (52091225..52092100)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (51853768..51854643)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene cDNA sequence AY358078 Neighboring gene hematological and neurological expressed 1-like pseudogene 1 Neighboring gene eosinophil-associated, ribonuclease A family, pseudogene 5 Neighboring gene STARR-positive B cell enhancer ABC_E7309 Neighboring gene STARR-positive B cell enhancer ABC_E2424 Neighboring gene methyltransferase like 17 Neighboring gene solute carrier family 39 (zinc transporter), member 2

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables RNA nuclease activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA nuclease activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables RNA nuclease activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables RNA nuclease activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables lipopolysaccharide binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in chemotaxis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in defense response to Gram-positive bacterium IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in innate immune response in mucosa IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    non-secretory ribonuclease
    Names
    eosinophil-associated ribonuclease 6
    NP_444341.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_053111.2NP_444341.1  non-secretory ribonuclease precursor

      See identical proteins and their annotated locations for NP_444341.1

      Status: PROVISIONAL

      Source sequence(s)
      AY316150
      Consensus CDS
      CCDS27045.1
      UniProtKB/TrEMBL
      Q923L7
      Related
      ENSMUSP00000074075.7, ENSMUST00000074477.7
      Conserved Domains (1) summary
      pfam00074
      Location:30152
      RnaseA; Pancreatic ribonuclease

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      52091225..52092100
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)