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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_023044.3 RefSeqGene
- Range
-
5000..72173
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001260492.2 → NP_001247421.1 radixin isoform 1
See identical proteins and their annotated locations for NP_001247421.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AP002788, CK299903, DQ916738
- Consensus CDS
-
CCDS58174.1
- UniProtKB/TrEMBL
-
A0A2R8Y5S7
- Related
- ENSP00000496414.1, ENST00000647231.1
- Conserved Domains (3) summary
-
- smart00295
Location:7 → 206
- B41; Band 4.1 homologues
- cd13194
Location:200 → 296
- FERM_C_ERM; FERM domain C-lobe/F3 of the ERM family
- pfam00769
Location:347 → 583
- ERM; Ezrin/radixin/moesin family
-
NM_001260493.2 → NP_001247422.1 radixin isoform 1
See identical proteins and their annotated locations for NP_001247422.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 3' UTR exon, compared to variant 1. Both variants 1 and 2 encode the same isoform 1.
- Source sequence(s)
-
AP000901, AP002788
- Consensus CDS
-
CCDS58174.1
- UniProtKB/TrEMBL
-
A0A2R8Y5S7
- Related
- ENSP00000432112.1, ENST00000528498.5
- Conserved Domains (3) summary
-
- smart00295
Location:7 → 206
- B41; Band 4.1 homologues
- cd13194
Location:200 → 296
- FERM_C_ERM; FERM domain C-lobe/F3 of the ERM family
- pfam00769
Location:347 → 583
- ERM; Ezrin/radixin/moesin family
-
NM_001260494.2 → NP_001247423.1 radixin isoform 3
See identical proteins and their annotated locations for NP_001247423.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks two internal coding exons and differs in the 3' region, compared to variant 1. The resulting isoform (3) lacks an internal segment and has a shorter C-terminus, compared to isoform 1.
- Source sequence(s)
-
AP000901, AP002788
- Consensus CDS
-
CCDS58172.1
- UniProtKB/TrEMBL
-
B7Z2S7
- Related
- ENSP00000445826.1, ENST00000544551.5
- Conserved Domains (3) summary
-
- cd13194
Location:64 → 160
- FERM_C_ERM; FERM domain C-lobe/F3 of the ERM family
- pfam00373
Location:22 → 70
- FERM_M; FERM central domain
- pfam00769
Location:211 → 447
- ERM; Ezrin/radixin/moesin family
-
NM_001260495.2 → NP_001247424.1 radixin isoform 4
See identical proteins and their annotated locations for NP_001247424.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks multiple exons in the coding region, compared to variant 1. The resulting isoform (4) lacks two internal segments, compared to isoform 1.
- Source sequence(s)
-
AP000901, AP002788
- Consensus CDS
-
CCDS58171.1
- UniProtKB/Swiss-Prot
-
P35241
- Related
- ENSP00000433580.1, ENST00000528900.5
- Conserved Domains (1) summary
-
- pfam00769
Location:1 → 236
- ERM; Ezrin/radixin/moesin family
-
NM_001260496.2 → NP_001247425.1 radixin isoform 5
See identical proteins and their annotated locations for NP_001247425.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) lacks multiple exons in the coding region, compared to variant 1. The resulting isoform (5) lacks two internal segments, compared to isoform 1.
- Source sequence(s)
-
AP000901, AP002788
- Consensus CDS
-
CCDS58173.1
- UniProtKB/Swiss-Prot
-
P35241
- Related
- ENSP00000436277.1, ENST00000530301.5
- Conserved Domains (2) summary
-
- smart00295
Location:7 → 131
- B41; Band 4.1 homologues
- pfam00769
Location:126 → 179
- ERM; Ezrin/radixin/moesin family
-
NM_002906.4 → NP_002897.1 radixin isoform 2
See identical proteins and their annotated locations for NP_002897.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 3' coding region and 3' UTR, compared to variant 1. The resulting isoform (2) has a shorter C-terminus, compared to isoform 1.
- Source sequence(s)
-
AP000901, AP002788
- Consensus CDS
-
CCDS8343.1
- UniProtKB/Swiss-Prot
- A7YIJ8, A7YIK0, A7YIK3, B7Z9U6, F5H1A7, P35241, Q86Y61
- UniProtKB/TrEMBL
- A0A2R8Y5S7, B0YJ88
- Related
- ENSP00000496503.2, ENST00000645495.2
- Conserved Domains (3) summary
-
- smart00295
Location:7 → 206
- B41; Band 4.1 homologues
- cd13194
Location:200 → 296
- FERM_C_ERM; FERM domain C-lobe/F3 of the ERM family
- pfam00769
Location:347 → 583
- ERM; Ezrin/radixin/moesin family
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000011.10 Reference GRCh38.p14 Primary Assembly
- Range
-
110174922..110296614 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047427390.1 → XP_047283346.1 radixin isoform X1
- UniProtKB/Swiss-Prot
- A7YIJ8, A7YIK0, A7YIK3, B7Z9U6, F5H1A7, P35241, Q86Y61
- UniProtKB/TrEMBL
- A0A2R8Y5S7, B0YJ88
-
XM_047427391.1 → XP_047283347.1 radixin isoform X2
- Related
-
ENST00000532461.5
Alternate T2T-CHM13v2.0
Genomic
-
NC_060935.1 Alternate T2T-CHM13v2.0
- Range
-
110184743..110306806 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054369600.1 → XP_054225575.1 radixin isoform X1
- UniProtKB/Swiss-Prot
- A7YIJ8, A7YIK0, A7YIK3, B7Z9U6, F5H1A7, P35241, Q86Y61
- UniProtKB/TrEMBL
- A0A2R8Y5S7, B0YJ88
-
XM_054369601.1 → XP_054225576.1 radixin isoform X2