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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001130031.2 → NP_001123503.1 zinc finger protein 562 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer protein (isoform a). Variants 1 and 2 encode the same protein.
- Source sequence(s)
-
AC008759, AI753280, BP221824, DC405554
- Consensus CDS
-
CCDS45956.1
- UniProtKB/Swiss-Prot
- Q32MN2, Q6V9R5, Q9NXS5
- Related
- ENSP00000410734.1, ENST00000453372.7
- Conserved Domains (4) summary
-
- COG5048
Location:258 → 420
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:318 → 338
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:181 → 198
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam01352
Location:40 → 81
- KRAB; KRAB box
-
NM_001130032.2 → NP_001123504.1 zinc finger protein 562 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses a different splice site in the 5' UTR, compared to variant 1. Variants 1 and 2 encode the same protein.
- Source sequence(s)
-
AC008759, AI753280, BP221824, DC403290
- Consensus CDS
-
CCDS45956.1
- UniProtKB/Swiss-Prot
- Q32MN2, Q6V9R5, Q9NXS5
- Conserved Domains (4) summary
-
- COG5048
Location:258 → 420
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:318 → 338
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:181 → 198
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam01352
Location:40 → 81
- KRAB; KRAB box
-
NM_001300885.2 → NP_001287814.1 zinc finger protein 562 isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1. It encodes isoform c, which is shorter by an amino acid, compared to isoform a.
- Source sequence(s)
-
AC008759, AI753280, AK297446, AK304370, BC109062
- Consensus CDS
-
CCDS74280.1
- UniProtKB/TrEMBL
-
K7EIE6
- Related
- ENSP00000464716.1, ENST00000590155.5
- Conserved Domains (7) summary
-
- smart00349
Location:41 → 85
- KRAB; krueppel associated box
- COG5048
Location:257 → 419
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:317 → 337
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:180 → 197
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam00096
Location:287 → 309
- zf-C2H2; Zinc finger, C2H2 type
- pfam01352
Location:41 → 80
- KRAB; KRAB box
- pfam13465
Location:358 → 382
- zf-H2C2_2; Zinc-finger double domain
-
NM_017656.4 → NP_060126.2 zinc finger protein 562 isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks alternate segments in the 5' coding region, compared to variant 1. The resulting protein (isoform b) has a shorter N-terminus when it is compared to isoform a.
- Source sequence(s)
-
AC008759, AI753280, AK000086, BP221824
- Consensus CDS
-
CCDS12217.1
- UniProtKB/Swiss-Prot
-
Q6V9R5
- Related
- ENSP00000293648.3, ENST00000293648.8
- Conserved Domains (3) summary
-
- COG5048
Location:186 → 348
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:246 → 266
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam13465
Location:287 → 311
- zf-H2C2_2; Zinc-finger double domain