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    Nxpe5 neurexophilin and PC-esterase domain family, member 5 [ Mus musculus (house mouse) ]

    Gene ID: 381680, updated on 27-Nov-2024

    Summary

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    Official Symbol
    Nxpe5provided by MGI
    Official Full Name
    neurexophilin and PC-esterase domain family, member 5provided by MGI
    Primary source
    MGI:MGI:3584036
    See related
    Ensembl:ENSMUSG00000047592 AllianceGenome:MGI:3584036
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in genital fat pad adult (RPKM 6.4), subcutaneous fat pad adult (RPKM 1.5) and 6 other tissues See more
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    Genomic context

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    See Nxpe5 in Genome Data Viewer
    Location:
    5 G2; 5 76.99 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (138205761..138250138)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (138207499..138251876)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene metallo-beta-lactamase domain containing 1 Neighboring gene predicted gene 454 Neighboring gene predicted gene, 22956 Neighboring gene STARR-positive B cell enhancer ABC_E532 Neighboring gene late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 Neighboring gene RIKEN cDNA 6330418K02 gene Neighboring gene trafficking protein particle complex 14 Neighboring gene STARR-positive B cell enhancer ABC_E4800

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Genetic determinants of micronucleus formation in vivo. Adams DJ, et al. Nature, 2024 Mar. PMID 38355793, Free PMC Article
    2. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
    3. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
    4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Variation

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    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (1) 

    General gene information

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    Homology

    Clone Names

    • MGC118496

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    neurexophilin and PC-esterase domain family, member 5
    Names
    Fam55 related

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001013773.3 → NP_001013795.3  neurexophilin and PC-esterase domain family, member 5

      Status: VALIDATED

      Source sequence(s)
      AC159257
      Consensus CDS
      CCDS51679.1
      UniProtKB/TrEMBL
      E9PXC9, Q7TPQ2
      Related
      ENSMUSP00000106554.3, ENSMUST00000110929.9
      Conserved Domains (1) summary
      pfam06312
      Location:118 → 257
      Neurexophilin

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      138205761..138250138
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017320941.1 → XP_017176430.1  neurexophilin and PC-esterase domain family, member 5 isoform X3

      UniProtKB/TrEMBL
      E0CYW5
      Conserved Domains (1) summary
      pfam06312
      Location:106 → 245
      Neurexophilin

    2. XM_011240943.1 → XP_011239245.1  neurexophilin and PC-esterase domain family, member 5 isoform X1

      UniProtKB/TrEMBL
      Q7TPQ2
      Conserved Domains (1) summary
      pfam06312
      Location:118 → 257
      Neurexophilin

    3. XM_011240945.1 → XP_011239247.1  neurexophilin and PC-esterase domain family, member 5 isoform X5

      UniProtKB/TrEMBL
      Q7TPQ2
      Conserved Domains (1) summary
      pfam06312
      Location:118 → 257
      Neurexophilin

    4. XM_017320940.1 → XP_017176429.1  neurexophilin and PC-esterase domain family, member 5 isoform X2

      UniProtKB/TrEMBL
      E0CX47, Q7TPQ2
      Related
      ENSMUSP00000124929.2, ENSMUST00000161047.8
      Conserved Domains (1) summary
      pfam06312
      Location:118 → 257
      Neurexophilin

    5. XM_011240946.1 → XP_011239248.1  neurexophilin and PC-esterase domain family, member 5 isoform X6

      UniProtKB/TrEMBL
      Q7TPQ2
      Conserved Domains (1) summary
      pfam06312
      Location:118 → 257
      Neurexophilin

    6. XM_017320942.1 → XP_017176431.1  neurexophilin and PC-esterase domain family, member 5 isoform X4

      UniProtKB/TrEMBL
      E9PXC9, Q7TPQ2
      Conserved Domains (1) summary
      pfam06312
      Location:118 → 257
      Neurexophilin

    7. XM_006504590.1 → XP_006504653.1  neurexophilin and PC-esterase domain family, member 5 isoform X7

      UniProtKB/TrEMBL
      Q7TPQ2
      Conserved Domains (1) summary
      pfam06312
      Location:118 → 257
      Neurexophilin
    Nucleotide Protein Strain
    Heading Accession and Version

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