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    ynaA putative prophage tail length tape measure domain-containing protein YnaA [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947543, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ynaA
    Official Full Name
    putative prophage tail length tape measure domain-containing protein YnaA
    Primary source
    ECOCYC:G6691
    Locus tag
    b1368
    See related
    ASAP:ABE-0004581
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1365; tmpR
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    Genomic context

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    Sequence:
    NC_000913.3 (1426454..1427482)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene K(+) transporter TrkG Neighboring gene ParB-like nuclease domain-containing protein YnaK Neighboring gene putative uncharacterized protein YdaY Neighboring gene pseudo Neighboring gene IS5 family transposase and trans-activator Neighboring gene putative prophage side tail fiber protein StfR Neighboring gene putative tail fiber assembly protein TfaR

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Length determination in bacteriophage lambda tails. Katsura I, et al. Cell, 1984 Dec. PMID 6096021
    2. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    3. Optimized fragmentation schemes and data analysis strategies for proteome-wide cross-link identification. Liu F, et al. Nat Commun, 2017 May 19. PMID 28524877, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

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    Preferred Names
    putative prophage tail length tape measure domain-containing protein YnaA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1426454..1427482
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009518778.1 putative prophage tail length tape measure domain-containing protein YnaA [Escherichia coli str. K-12 substr. MG1655]

      Status: PROVISIONAL

      Conserved Domains (3) summary
      COG1196
      Location:17 → 262
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG5281
      Location:181 → 311
      COG5281; Phage-related minor tail protein [Mobilome: prophages, transposons]
      pfam06791
      Location:268 → 311
      TMP_2; Prophage tail length tape measure protein
    Nucleotide Protein
    Heading Accession and Version

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