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    yfdP uncharacterized protein YfdP [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945565, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yfdP
    Official Full Name
    uncharacterized protein YfdP
    Primary source
    ECOCYC:G7228
    Locus tag
    b2359
    See related
    ASAP:ABE-0007785
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2353
    Summary
    YfdP was previously annotated as a C-terminal pseudogene, but reanalysis indicates that a conserved protein of 120 aa, with an apparent RBS signal, should be predicted instead. [More information is available at EcoGene: EG14138].
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    Genomic context

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    Sequence:
    NC_000913.3 (2473604..2473966)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative methyltransferase YfdM Neighboring gene uncharacterized protein YfdN Neighboring gene protein YdfO Neighboring gene DUF2303 domain-containing protein YfdQ Neighboring gene 5'-deoxynucleotidase Neighboring gene protein YfdS

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of a chromosomally encoded, non-PTS metabolic pathway for sucrose utilization in Escherichia coli EC3132. Bockmann J, et al. Mol Gen Genet, 1992 Oct. PMID 1435727
    2. Control and regulation of KplE1 prophage site-specific recombination: a new recombination module analyzed. Panis G, et al. J Biol Chem, 2007 Jul 27. PMID 17545146
    3. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    4. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein YfdP

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2473604..2473966
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416860.4 uncharacterized protein YfdP [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416860.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5B9AMQ7
    Nucleotide Protein
    Heading Accession and Version

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    Other Literature Sources
    Molecular Biology Databases
    Research Materials