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    ygiZ DUF2645 domain-containing inner membrane protein YgiZ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946450, updated on 17-Dec-2024

    Summary

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    Official Symbol
    ygiZ
    Official Full Name
    DUF2645 domain-containing inner membrane protein YgiZ
    Primary source
    ECOCYC:G7577
    Locus tag
    b3027
    See related
    ASAP:ABE-0009940
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3018
    Summary
    YgiZ is an inner membrane protein with three predicted transmembrane domains. [More information is available at EcoCyc: G7577].
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    Genomic context

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    Sequence:
    NC_000913.3 (3171879..3172211, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene BOF family protein YgiW Neighboring gene DNA-binding transcriptional activator QseB Neighboring gene sensor histidine kinase QseC Neighboring gene NADPH:quinone oxidoreductase MdaB Neighboring gene putative quinol monooxygenase YgiN

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cell-free complements in vivo expression of the E. coli membrane proteome. Savage DF, et al. Protein Sci, 2007 May. PMID 17456747, Free PMC Article
    2. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
    3. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    DUF2645 domain-containing inner membrane protein YgiZ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3171879..3172211 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417499.1 DUF2645 domain-containing inner membrane protein YgiZ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417499.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376FWJ0
    Nucleotide Protein
    Heading Accession and Version

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