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    lomR [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 4056036, updated on 3-Dec-2024

    Summary

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    Official Symbol
    lomR
    Primary source
    ECOCYC:G6692
    Locus tag
    b4570
    See related
    ASAP:ABE-0285103
    Gene type
    pseudo
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    b1369; b1371; ECK1366
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    Genomic context

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    Sequence:
    NC_000913.3 (1427389..1428984)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene K(+) transporter TrkG Neighboring gene ParB-like nuclease domain-containing protein YnaK Neighboring gene putative uncharacterized protein YdaY Neighboring gene putative prophage tail length tape measure domain-containing protein YnaA Neighboring gene IS5 family transposase and trans-activator Neighboring gene putative prophage side tail fiber protein StfR Neighboring gene putative tail fiber assembly protein TfaR

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A systematic investigation identifies a significant number of probable pseudogenes in the Escherichia coli genome. Homma K, et al. Gene, 2002 Jul 10. PMID 12234664
    2. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    3. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Miscellaneous features

    • Loc: 1427389-1427598 gene fragment 1 of lomR
    • Loc: 1428796-1428984 gene fragment 2 of lomR

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in host outer membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

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