U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    yadV putative fimbrial chaperone YadV [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 944859, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    yadV
    Official Full Name
    putative fimbrial chaperone YadV
    Primary source
    ECOCYC:EG11973
    Locus tag
    b0140
    See related
    ASAP:ABE-0000482
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0139; ecpD
    Summary
    EcpD has Ig-like domains: pfam PF00345 aligns to N-terminal residues 26-145, and pfam PF02753 aligns to C-terminal residues 157-244. [More information is available at EcoGene: EG11973]. EcpD has similarity to PapD pilin chaperones . [More information is available at EcoCyc: EG11973].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (155461..156201, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative fimbrial protein YadM Neighboring gene putative fimbrial usher protein HtrE Neighboring gene putative fimbrial protein YadN Neighboring gene 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase Neighboring gene poly(A) polymerase I

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Functional analysis of Escherichia coli Yad fimbriae reveals their potential role in environmental persistence. Larsonneur F, et al. Environ Microbiol, 2016 Dec. PMID 27696649
    2. Conserved immunoglobulin-like features in a family of periplasmic pilus chaperones in bacteria. Holmgren A, et al. EMBO J, 1992 Apr. PMID 1348692, Free PMC Article
    3. Role of the Escherichia coli Tat pathway in outer membrane integrity. Ize B, et al. Mol Microbiol, 2003 Jun. PMID 12787348
    4. Identification and transcriptional analysis of the Escherichia coli htrE operon which is homologous to pap and related pilin operons. Raina S, et al. J Bacteriol, 1993 Aug. PMID 8102362, Free PMC Article
    5. Systematic sequencing of the Escherichia coli genome: analysis of the 2.4-4.1 min (110,917-193,643 bp) region. Fujita N, et al. Nucleic Acids Res, 1994 May 11. PMID 8202364, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables protein folding chaperone IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell adhesion IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in cell wall organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in chaperone-mediated protein folding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in chaperone-mediated protein folding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in outer membrane-bounded periplasmic space IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in outer membrane-bounded periplasmic space IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in periplasmic space IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    putative fimbrial chaperone YadV

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      155461..156201 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414682.1 putative fimbrial chaperone YadV [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414682.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0AAN5UCW8
      Conserved Domains (1) summary
      PRK09926
      Location:1 → 246
      PRK09926; fimbrial chaperone
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.