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    pelF pellicle/biofilm biosynthesis glycosyltransferase PelF [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 879152, updated on 14-Nov-2024

    Summary

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    Gene symbol
    pelF
    Gene description
    pellicle/biofilm biosynthesis glycosyltransferase PelF
    Locus tag
    PA3059
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (3423068..3424591, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene pellicle/biofilm biosynthesis Wzx-like polysaccharide transporter PelG Neighboring gene pellicle/biofilm biosynthesis protein PelE Neighboring gene pellicle/biofilm biosynthesis protein PelD Neighboring gene pellicle/biofilm biosynthesis outer membrane protein PelC

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pel Polysaccharide Biosynthesis Requires an Inner Membrane Complex Comprised of PelD, PelE, PelF, and PelG. Whitfield GB, et al. J Bacteriol, 2020 Mar 26. PMID 31988082, Free PMC Article
    2. The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics. Cantarel BL, et al. Nucleic Acids Res, 2009 Jan. PMID 18838391, Free PMC Article
    3. Role of PelF in pel polysaccharide biosynthesis in Pseudomonas aeruginosa. Ghafoor A, et al. Appl Environ Microbiol, 2013 May. PMID 23435893, Free PMC Article
    4. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    5. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Function Evidence Code Pubs
    enables glycosyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within polysaccharide biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within single-species biofilm formation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pellicle/biofilm biosynthesis glycosyltransferase PelF
    NP_251749.1
    • class 1: Function experimentally demonstrated in P. aeruginosa

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      3423068..3424591 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_251749.1 pellicle/biofilm biosynthesis glycosyltransferase PelF [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_251749.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q9HZE9
      Conserved Domains (1) summary
      NF038011
      Location:13 → 500
      PelF; GT4 family glycosyltransferase PelF
    Nucleotide Protein
    Heading Accession and Version

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