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    rplU 50S ribosomal protein L21 [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 881148, updated on 11-Sep-2024

    Summary

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    Gene symbol
    rplU
    Gene description
    50S ribosomal protein L21
    Locus tag
    PA4568
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (5116313..5116624, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene GTPase ObgE Neighboring gene 50S ribosomal protein L27 Neighboring gene octaprenyl-diphosphate synthase Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Precise determination of RNA-protein contact sites in the 50 S ribosomal subunit of Escherichia coli. Thiede B, et al. Biochem J, 1998 Aug 15. PMID 9693099, Free PMC Article
    2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
    5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Process Evidence Code Pubs
    acts_upstream_of_or_within translation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    50S ribosomal protein L21
    NP_253258.1
    • Product name confidence: class 2 (High similarity to functionally studied protein)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      5116313..5116624 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_253258.1 50S ribosomal protein L21 [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_253258.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9HVL6
      Conserved Domains (1) summary
      PRK05573
      Location:1 → 103
      rplU; 50S ribosomal protein L21; Validated
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9HVL6.1

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