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    SNORD56 small nucleolar RNA, C/D box 56 [ Homo sapiens (human) ]

    Gene ID: 26793, updated on 2-Nov-2024

    Summary

    Official Symbol
    SNORD56provided by HGNC
    Official Full Name
    small nucleolar RNA, C/D box 56provided by HGNC
    Primary source
    HGNC:HGNC:10206
    See related
    Ensembl:ENSG00000229686 AllianceGenome:HGNC:10206
    Gene type
    snoRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    U56; RNU56
    Summary
    Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See SNORD56 in Genome Data Viewer
    Location:
    20p13
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (2656624..2656694)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (2687091..2687161)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (2637270..2637340)

    Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene NOP56 ribonucleoprotein Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:2636106-2636623 Neighboring gene small nucleolar RNA, H/ACA box 51 Neighboring gene small nucleolar RNA, C/D box 86 Neighboring gene small nucleolar RNA, C/D box 57 Neighboring gene MPRA-validated peak4124 silencer Neighboring gene isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:2643139-2643926

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Other Names

    • RNA, U56 small nuclear

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_002739.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      X96655
      Related
      ENST00000413522.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

      Range
      2656624..2656694
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060944.1 Alternate T2T-CHM13v2.0

      Range
      2687091..2687161
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)