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    RNVU1-8 RNA, variant U1 small nuclear 8 [ Homo sapiens (human) ]

    Gene ID: 101447996, updated on 10-Dec-2024

    Summary

    Official Symbol
    RNVU1-8provided by HGNC
    Official Full Name
    RNA, variant U1 small nuclear 8provided by HGNC
    Primary source
    HGNC:HGNC:48315
    See related
    Ensembl:ENSG00000286172 AllianceGenome:HGNC:48315
    Gene type
    snRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    vU1.8; RNU1-145
    Summary
    Predicted to enable pre-mRNA 5'-splice site binding activity. Predicted to be involved in mRNA 5'-splice site recognition. Predicted to be part of U1 snRNP. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See RNVU1-8 in Genome Data Viewer
    Location:
    1q21.1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (147084616..147084756, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (147723683..147723823)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (146556163..146556303, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:146552193-146552898 Neighboring gene RNA, U1 small nuclear 151, pseudogene Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:146556258-146556861 Neighboring gene small RNA binding exonuclease protection factor La like 4, pseudogene Neighboring gene NBPF member 13, pseudogene Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr1:146633127-146634326 Neighboring gene protein kinase AMP-activated non-catalytic subunit beta 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1277

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables pre-mRNA 5'-splice site binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in mRNA 5'-splice site recognition IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of U1 snRNP IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_121645.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC241584
      Related
      ENST00000651973.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      147084616..147084756 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      147723683..147723823
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)