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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_016020.1 RefSeqGene
- Range
-
5003..110295
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001165966.2 → NP_001159438.1 membrane-associated phosphatidylinositol transfer protein 3 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 5' coding region, compared to variant 1. The resulting isoform (2) lacks an internal segment, compared to isoform 1.
- Source sequence(s)
-
AC055872, AI333030, BC035799, BC128583
- Consensus CDS
-
CCDS54080.1
- UniProtKB/TrEMBL
-
A1A5C9
- Related
- ENSP00000407882.3, ENST00000421306.7
- Conserved Domains (2) summary
-
- smart00775
Location:703 → 833
- LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
- pfam02862
Location:357 → 557
- DDHD; DDHD domain
-
NM_031220.4 → NP_112497.2 membrane-associated phosphatidylinositol transfer protein 3 isoform 1
See identical proteins and their annotated locations for NP_112497.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AC055872, AF334586, AI333030, BC035799
- Consensus CDS
-
CCDS11076.1
- UniProtKB/Swiss-Prot
- A1A5D0, F8WEW5, Q59GH9, Q9BZ71, Q9NPQ4
- UniProtKB/TrEMBL
-
A1A5C9
- Related
- ENSP00000262483.8, ENST00000262483.13
- Conserved Domains (2) summary
-
- smart00775
Location:739 → 869
- LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
- pfam02862
Location:393 → 593
- DDHD; DDHD domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000017.11 Reference GRCh38.p14 Primary Assembly
- Range
-
6451263..6556555 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011524015.4 → XP_011522317.1 membrane-associated phosphatidylinositol transfer protein 3 isoform X1
- UniProtKB/TrEMBL
-
A1A5C9
- Conserved Domains (2) summary
-
- pfam02862
Location:393 → 593
- DDHD; DDHD domain
- cl21460
Location:739 → 830
- HAD_like; Haloacid Dehalogenase-like Hydrolases
-
XM_011524016.4 → XP_011522318.1 membrane-associated phosphatidylinositol transfer protein 3 isoform X2
- Conserved Domains (2) summary
-
- pfam02862
Location:393 → 593
- DDHD; DDHD domain
- cl21460
Location:739 → 770
- HAD_like; Haloacid Dehalogenase-like Hydrolases
-
XM_011524017.4 → XP_011522319.1 membrane-associated phosphatidylinositol transfer protein 3 isoform X3
- Conserved Domains (1) summary
-
- pfam02862
Location:393 → 495
- DDHD; DDHD domain
Alternate T2T-CHM13v2.0
Genomic
-
NC_060941.1 Alternate T2T-CHM13v2.0
- Range
-
6350993..6456410 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054317461.1 → XP_054173436.1 membrane-associated phosphatidylinositol transfer protein 3 isoform X1
- UniProtKB/TrEMBL
-
A1A5C9
-
XM_054317462.1 → XP_054173437.1 membrane-associated phosphatidylinositol transfer protein 3 isoform X2
-
XM_054317463.1 → XP_054173438.1 membrane-associated phosphatidylinositol transfer protein 3 isoform X3