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    Gm5643 predicted gene 5643 [ Mus musculus (house mouse) ]

    Gene ID: 434858, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm5643provided by MGI
    Official Full Name
    predicted gene 5643provided by MGI
    Primary source
    MGI:MGI:3642955
    See related
    AllianceGenome:MGI:3642955
    Gene type
    pseudo
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG434858
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    Genomic context

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    See Gm5643 in Genome Data Viewer
    Location:
    X F2; X 63.1 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (141080501..141082233)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (142297505..142299237)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene retinoblastoma binding protein 7 pseudogene Neighboring gene STARR-positive B cell enhancer mm9_chrX:138662261-138662562 Neighboring gene nuclear transport factor 2-like export factor 2 Neighboring gene potassium voltage-gated channel subfamily E regulatory subunit 5 Neighboring gene acyl-CoA synthetase long-chain family member 4 Neighboring gene STARR-seq mESC enhancer starr_48018

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, et al. Nature, 2002 Dec 5. PMID 12466851

    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • heterogeneous nuclear ribonucleoprotein A1 pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_002883.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AL731672

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      141080501..141082233
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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