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    Samt3 spermatogenesis associated multipass transmembrane protein 3 [ Mus musculus (house mouse) ]

    Gene ID: 73495, updated on 9-Dec-2024

    Summary

    Official Symbol
    Samt3provided by MGI
    Official Full Name
    spermatogenesis associated multipass transmembrane protein 3provided by MGI
    Primary source
    MGI:MGI:1920745
    See related
    Ensembl:ENSMUSG00000035454 AllianceGenome:MGI:1920745
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1700072E05Rik
    Summary
    Predicted to be involved in bicellular tight junction assembly and cell adhesion. Predicted to be active in bicellular tight junction and plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward testis adult (RPKM 3.4) See more
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    Genomic context

    See Samt3 in Genome Data Viewer
    Location:
    X C1; X 39.55 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (85087805..85090919)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (86044199..86047313)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene TLR adaptor interacting with endolysosomal SLC15A4 Neighboring gene predicted gene 14762 Neighboring gene predicted gene, 54063 Neighboring gene STARR-seq mESC enhancer starr_47497 Neighboring gene STARR-seq mESC enhancer starr_47498 Neighboring gene Nr0b1 5' regulatory region Neighboring gene Nr0b1 intronic regulatory region Neighboring gene nuclear receptor subfamily 0, group B, member 1 Neighboring gene MAGE family member B4

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in bicellular tight junction assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cell adhesion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in bicellular tight junction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC73495

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_028554.3NP_082830.2  uncharacterized protein LOC73495

      See identical proteins and their annotated locations for NP_082830.2

      Status: VALIDATED

      Source sequence(s)
      AK006935, AL845448
      Consensus CDS
      CCDS30259.1
      UniProtKB/TrEMBL
      A2ARK7, Q9D9H1
      Related
      ENSMUSP00000036724.2, ENSMUST00000047945.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      85087805..85090919
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)