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    TPRG1L tumor protein p63 regulated 1 like [ Homo sapiens (human) ]

    Gene ID: 127262, updated on 10-Dec-2024

    Summary

    Official Symbol
    TPRG1Lprovided by HGNC
    Official Full Name
    tumor protein p63 regulated 1 likeprovided by HGNC
    Primary source
    HGNC:HGNC:27007
    See related
    Ensembl:ENSG00000158109 MIM:611460; AllianceGenome:HGNC:27007
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    TPRGL; mover; FAM79A; SVAP30; h-mover
    Summary
    Predicted to enable calmodulin binding activity and identical protein binding activity. Predicted to be involved in presynaptic modulation of chemical synaptic transmission; regulation of glutamatergic synaptic transmission; and regulation of synaptic vesicle exocytosis. Predicted to act upstream of or within calcineurin-NFAT signaling cascade; negative regulation of synaptic transmission; and synaptic vesicle docking. Located in extracellular exosome. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in brain (RPKM 35.5), kidney (RPKM 30.0) and 25 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See TPRG1L in Genome Data Viewer
    Location:
    1p36.32
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (3625015..3630127)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (3135110..3140200)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (3541579..3546691)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene multiple EGF like domains 6 Neighboring gene uncharacterized LOC105378608 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:3493527-3494026 Neighboring gene microRNA 551a Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:3506712-3507277 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:3507278-3507842 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:3508323-3509002 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:3513146-3514042 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:3529609-3530355 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:3530356-3531101 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:3535070-3535978 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 60 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 121 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:3541953-3542615 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:3557544-3558044 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:3558876-3559121 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:3566888-3567731 Neighboring gene WD repeat containing, antisense to TP73 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 122 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 61 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 62 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 63 Neighboring gene TP73 antisense RNA 3 Neighboring gene tumor protein p73

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • FLJ21811

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables identical protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in calcineurin-NFAT signaling cascade IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of synaptic transmission, glutamatergic ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in synaptic vesicle docking IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in calyx of Held ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular exosome HDA PubMed 
    located_in presynaptic active zone IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in synaptic vesicle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in synaptic vesicle ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    located_in synaptic vesicle membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    tumor protein p63-regulated gene 1-like protein
    Names
    RP11-46F15.3
    family with sequence similarity 79, member A
    mossy fiber terminal-associated vertebrate-specific presynaptic protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_182752.4NP_877429.2  tumor protein p63-regulated gene 1-like protein

      See identical proteins and their annotated locations for NP_877429.2

      Status: VALIDATED

      Source sequence(s)
      AL513320, BC019034
      Consensus CDS
      CCDS47.1
      UniProtKB/Swiss-Prot
      A8K1K4, Q5T0D9, Q8WV04
      UniProtKB/TrEMBL
      B4DPH8
      Related
      ENSP00000367595.2, ENST00000378344.7
      Conserved Domains (1) summary
      pfam12456
      Location:67168
      hSac2; Inositol phosphatase

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      3625015..3630127
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      3135110..3140200
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)