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    ccep-135 uncharacterized protein [ Caenorhabditis elegans ]

    Gene ID: 175416, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ccep-135
    Official Full Name
    uncharacterized protein
    Primary source
    WormBase:WBGene00019167
    Locus tag
    CELE_H06I04.1
    See related
    AllianceGenome:WB:WBGene00019167
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See ccep-135 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    5
    Sequence:
    Chromosome: III; NC_003281.10 (3091872..3100468)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Putative rRNA methyltransferase;rRNA methyltransferase Neighboring gene SURF1-like protein Neighboring gene tRNA Neighboring gene tRNA Neighboring gene Acyltransferase Neighboring gene tRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Reboul J, et al. Nat Genet, 2003 May. PMID 12679813
    2. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
    3. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
    4. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
    5. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_001299874.1
    • Confirmed by transcript evidence;
      Product from WormBase gene class ccep; C. elegans CEntrosomal Protein
    NP_001364790.1
    • Confirmed by transcript evidence;
      Product from WormBase gene class ccep; C. elegans CEntrosomal Protein
    NP_001364840.1
    • Confirmed by transcript evidence;
      Product from WormBase gene class ccep; C. elegans CEntrosomal Protein
    NP_741103.1
    • Confirmed by transcript evidence;
      Product from WormBase gene class ccep; C. elegans CEntrosomal Protein
    NP_741104.1
    • Confirmed by transcript evidence;
      Product from WormBase gene class ccep; C. elegans CEntrosomal Protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      3091872..3100468
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_171091.8 → NP_741104.1  uncharacterized protein CELE_H06I04.1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741104.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MXV4
      Conserved Domains (1) summary
      COG1196
      Location:139 → 397
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    2. NM_171090.7 → NP_741103.1  uncharacterized protein CELE_H06I04.1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741103.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9N5N7
      Conserved Domains (1) summary
      COG1196
      Location:139 → 445
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    3. NM_001312945.3 → NP_001299874.1  uncharacterized protein CELE_H06I04.1 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AU49
      Conserved Domains (1) summary
      COG1196
      Location:89 → 395
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    4. NM_001377917.2 → NP_001364840.1  uncharacterized protein CELE_H06I04.1 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AR97
      Conserved Domains (1) summary
      PHA02562
      Location:91 → 249
      46; endonuclease subunit; Provisional

    5. NM_001377918.1 → NP_001364790.1  uncharacterized protein CELE_H06I04.1 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MXV3
      Conserved Domains (1) summary
      NF033930
      Location:18 → 188
      pneumo_PspA; pneumococcal surface protein A
    Nucleotide Protein
    Heading Accession and Version

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