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    Y40B10A.9 Lipase_GDSL domain-containing protein;Phospholipase B1, membrane-associated [ Caenorhabditis elegans ]

    Gene ID: 178687, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y40B10A.9
    Official Full Name
    Lipase_GDSL domain-containing protein;Phospholipase B1, membrane-associated
    Primary source
    WormBase:WBGene00021493
    Locus tag
    CELE_Y40B10A.9
    See related
    AllianceGenome:WB:WBGene00021493
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable phospholipase activity. Predicted to be involved in phospholipid metabolic process. Predicted to be located in membrane. Is expressed in body wall musculature. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y40B10A.9 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    6
    Sequence:
    Chromosome: V; NC_003283.11 (2069138..2072907, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene O-methyltransferase Neighboring gene Catechol O-methyltransferase domain-containing protein 1 Neighboring gene Nuclear hormone receptor family member nhr-86 Neighboring gene Cytosolic fatty-acid binding proteins domain-containing protein;Fatty acid-binding protein homolog 9 Neighboring gene Glycosyltransferase family 92 protein Neighboring gene Glycosyltransferase family 92 protein Neighboring gene C2H2-type domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables phospholipase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables phospholipase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in phospholipid metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Lipase_GDSL domain-containing protein;Phospholipase B1, membrane-associated
    NP_001300247.1
    • Confirmed by transcript evidence
    NP_503563.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      2069138..2072907 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_071162.6 → NP_503563.1  Phospholipase B1, membrane-associated [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_503563.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q965W0
      Conserved Domains (1) summary
      cd01824
      Location:90 → 333
      Phospholipase_B_like; Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and ...

    2. NM_001313318.3 → NP_001300247.1  Lipase_GDSL domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3ASG0
      Conserved Domains (1) summary
      cl01053
      Location:1 → 200
      SGNH_hydrolase; SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely ...
    Nucleotide Protein
    Heading Accession and Version

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