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    arrd-4 Arrestin C-terminal-like domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 174540, updated on 9-Dec-2024

    Summary

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    Official Symbol
    arrd-4
    Official Full Name
    Arrestin C-terminal-like domain-containing protein
    Primary source
    WormBase:WBGene00014159
    Locus tag
    CELE_ZK938.2
    See related
    AllianceGenome:WB:WBGene00014159
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in protein transport. Predicted to be active in cytoplasm. Is expressed in PVQ and ciliated neurons. Orthologous to human ARRDC5 (arrestin domain containing 5). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See arrd-4 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    3
    Sequence:
    Chromosome: II; NC_003280.10 (9837009..9838310, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene gluconokinase Neighboring gene ncRNA Neighboring gene Arrestin C-terminal-like domain-containing protein Neighboring gene Arrestin-like N-terminal domain-containing protein Neighboring gene RNase H type-1 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. NeuroPAL: A Multicolor Atlas for Whole-Brain Neuronal Identification in C. elegans. Yemini E, et al. Cell, 2021 Jan 7. PMID 33378642, Free PMC Article
    2. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in protein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Arrestin C-terminal-like domain-containing protein
    NP_496120.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      9837009..9838310 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063719.4 → NP_496120.1  Arrestin C-terminal-like domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496120.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q23672
      Conserved Domains (2) summary
      pfam00339
      Location:8 → 141
      Arrestin_N; Arrestin (or S-antigen), N-terminal domain
      pfam02752
      Location:163 → 310
      Arrestin_C; Arrestin (or S-antigen), C-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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