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    gldi-7 Sodium/potassium-transporting ATPase subunit beta-1-interacting protein [ Caenorhabditis elegans ]

    Gene ID: 174365, updated on 9-Dec-2024

    Summary

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    Official Symbol
    gldi-7
    Official Full Name
    Sodium/potassium-transporting ATPase subunit beta-1-interacting protein
    Primary source
    WormBase:WBGene00011760
    Locus tag
    CELE_T13H5.6
    See related
    AllianceGenome:WB:WBGene00011760
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in regulation of sodium ion transport. Predicted to be located in plasma membrane. Is expressed in head mesodermal cell; intestine; nervous system; pharynx; and seam cell. Orthologous to several human genes including NKAIN2 (sodium/potassium transporting ATPase interacting 2); NKAIN3 (sodium/potassium transporting ATPase interacting 3); and NKAIN4 (sodium/potassium transporting ATPase interacting 4). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See gldi-7 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    5
    Sequence:
    Chromosome: II; NC_003280.10 (8526799..8531222, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene GH18 domain-containing protein Neighboring gene Matrin-type domain-containing protein Neighboring gene 28S ribosomal protein S18-2, mitochondrial Neighboring gene ncRNA Neighboring gene DUF148 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Dose-dependent functions of SWI/SNF BAF in permitting and inhibiting cell proliferation in vivo. van der Vaart A, et al. Sci Adv, 2020 May. PMID 32494730, Free PMC Article
    2. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
    3. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
    4. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
    5. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in regulation of sodium ion transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in regulation of sodium ion transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Sodium/potassium-transporting ATPase subunit beta-1-interacting protein
    NP_495801.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      8526799..8531222 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063400.7 → NP_495801.1  Sodium/potassium-transporting ATPase subunit beta-1-interacting protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495801.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U369
      Conserved Domains (1) summary
      pfam05640
      Location:16 → 155
      NKAIN; Na,K-Atpase Interacting protein
    Nucleotide Protein
    Heading Accession and Version

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