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    tbc-17 CRC domain-containing protein;Rab-GAP TBC domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 174900, updated on 9-Dec-2024

    Summary

    Official Symbol
    tbc-17
    Official Full Name
    CRC domain-containing protein;Rab-GAP TBC domain-containing protein
    Primary source
    WormBase:WBGene00012894
    Locus tag
    CELE_Y46G5A.1
    See related
    AllianceGenome:WB:WBGene00012894
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable GTPase activator activity. Orthologous to several human genes including USP6NL (USP6 N-terminal like). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See tbc-17 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    18
    Sequence:
    Chromosome: II; NC_003280.10 (12694412..12725566)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Heme O synthase Neighboring gene U5 small nuclear ribonucleoprotein 200 kDa helicase Neighboring gene ncRNA Neighboring gene tRNA-Arg Neighboring gene ncRNA Neighboring gene CDP-diacylglycerol--inositol 3-phosphatidyltransferase

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    CRC domain-containing protein;Rab-GAP TBC domain-containing protein
    NP_001022434.2
    • Confirmed by transcript evidence
    NP_001022435.2
    • Confirmed by transcript evidence
    NP_001254355.1
    • Confirmed by transcript evidence
    NP_001254356.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      12694412..12725566
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001027263.7NP_001022434.2  Rab-GAP TBC domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001022434.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U2D8
      Conserved Domains (1) summary
      smart00164
      Location:577788
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    2. NM_001027264.8NP_001022435.2  Rab-GAP TBC domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001022435.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K711
      Conserved Domains (1) summary
      smart00164
      Location:577788
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    3. NM_001267426.3NP_001254355.1  CRC domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001254355.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H1UBJ3
    4. NM_001267427.5NP_001254356.1  Rab-GAP TBC domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001254356.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7FAS5
      Conserved Domains (1) summary
      smart00164
      Location:281492
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs