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    C42C1.8 MFS domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 178179, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C42C1.8
    Official Full Name
    MFS domain-containing protein
    Primary source
    WormBase:WBGene00016586
    Locus tag
    CELE_C42C1.8
    See related
    AllianceGenome:WB:WBGene00016586
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be active in membrane. Orthologous to human SLC49A3 (solute carrier family 49 member 3). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C42C1.8 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    4
    Sequence:
    Chromosome: IV; NC_003282.8 (12291046..12293287)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Erlin Neighboring gene Protein kinase domain-containing protein Neighboring gene Acyl_transf_3 domain-containing protein Neighboring gene ncRNA Neighboring gene Acyl_transf_3 domain-containing protein Neighboring gene ncRNA Neighboring gene Acyl_transf_3 domain-containing protein;Acyltransferase 3 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    MFS domain-containing protein
    NP_502341.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      12291046..12293287
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069940.7 → NP_502341.1  MFS domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_502341.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A3QMB7
      Conserved Domains (2) summary
      cd06174
      Location:88 → 499
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      pfam07690
      Location:91 → 439
      MFS_1; Major Facilitator Superfamily
    Nucleotide Protein
    Heading Accession and Version

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