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    C33A11.2 Aa_trans domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 181626, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C33A11.2
    Official Full Name
    Aa_trans domain-containing protein
    Primary source
    WormBase:WBGene00007878
    Locus tag
    CELE_C33A11.2
    See related
    AllianceGenome:WB:WBGene00007878
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Is expressed in several structures, including CAN; gonad; head; pharyngeal cell; and tail. Human ortholog(s) of this gene implicated in cone-rod dystrophy 21. Orthologous to several human genes including DRAM2 (DNA damage regulated autophagy modulator 2). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C33A11.2 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    5
    Sequence:
    Chromosome: X; NC_003284.9 (15365992..15369999)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ANK repeat-containing protein nipk-1 Neighboring gene ncRNA Neighboring gene tRNA Neighboring gene ETS domain-containing protein;Ets-domain protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Aa_trans domain-containing protein
    NP_510541.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      15365992..15369999
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_078140.8 → NP_510541.1  Aa_trans domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_510541.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q93319
      Conserved Domains (1) summary
      pfam10277
      Location:9 → 241
      Frag1; Frag1/DRAM/Sfk1 family
    Nucleotide Protein
    Heading Accession and Version

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