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    • Showing Current items.

    H20J04.6 Transmembrane protein 222 [ Caenorhabditis elegans ]

    Gene ID: 173766, updated on 9-Dec-2024

    Summary

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    Official Symbol
    H20J04.6
    Official Full Name
    Transmembrane protein 222
    Primary source
    WormBase:WBGene00019221
    Locus tag
    CELE_H20J04.6
    See related
    AllianceGenome:WB:WBGene00019221
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Orthologous to human TMEM222 (transmembrane protein 222). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See H20J04.6 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003280.10 (4323256..4324235)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene RING-type domain-containing protein Neighboring gene RNA helicase Neighboring gene putative U2 small nuclear ribonucleoprotein A' Neighboring gene Prefoldin subunit 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly. Schaan Profes M, et al. PLoS Biol, 2024 Jan. PMID 38252619, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Transmembrane protein 222
    NP_494762.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      4323256..4324235
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_062361.6 → NP_494762.2  Transmembrane protein 222 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_494762.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9N5M3
      Conserved Domains (1) summary
      pfam05608
      Location:25 → 140
      DUF778; Protein of unknown function (DUF778)
    Nucleotide Protein
    Heading Accession and Version

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