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    R04B5.6 Sorbitol dehydrogenase [ Caenorhabditis elegans ]

    Gene ID: 179404, updated on 9-Dec-2024

    Summary

    Official Symbol
    R04B5.6
    Official Full Name
    Sorbitol dehydrogenase
    Primary source
    WormBase:WBGene00011004
    Locus tag
    CELE_R04B5.6
    See related
    AllianceGenome:WB:WBGene00011004
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable L-iditol 2-dehydrogenase (NAD+) activity. Predicted to be involved in sorbitol catabolic process. Is expressed in head neurons and pharyngeal cell. Human ortholog(s) of this gene implicated in autosomal recessive distal hereditary motor neuronopathy 8. Orthologous to human SORD (sorbitol dehydrogenase). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See R04B5.6 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    6
    Sequence:
    Chromosome: V; NC_003283.11 (10085164..10087363)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Nuclear Hormone Receptor family Neighboring gene ncRNA Neighboring gene Nuclear hormone receptor family member nhr-12;Nuclear receptor Neighboring gene Sorbitol dehydrogenase Neighboring gene BHLH domain-containing protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables L-iditol 2-dehydrogenase (NAD+) activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in sorbitol catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    Sorbitol dehydrogenase
    NP_505590.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      10085164..10087363
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_073189.6NP_505590.1  Sorbitol dehydrogenase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_505590.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q21703
      Conserved Domains (1) summary
      cd05285
      Location:7347
      sorbitol_DH; Sorbitol dehydrogenase