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    spat-1 Protein aurora borealis [ Caenorhabditis elegans ]

    Gene ID: 175113, updated on 9-Dec-2024

    Summary

    Official Symbol
    spat-1
    Official Full Name
    Protein aurora borealis
    Primary source
    WormBase:WBGene00010198
    Locus tag
    CELE_F57C2.6
    See related
    AllianceGenome:WB:WBGene00010198
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable protein kinase binding activity. Involved in positive regulation of mitotic cell cycle. Located in cytoplasm; kinetochore; and nucleus. Is expressed in EMS and P2. Orthologous to human BORA (BORA aurora kinase A activator). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See spat-1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    9
    Sequence:
    Chromosome: II; NC_003280.10 (14528752..14534174)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Toxin Neighboring gene Strictosidine synthase conserved region domain-containing protein Neighboring gene Multifunctional methyltransferase subunit TRM112-like protein Neighboring gene C-type lectin domain-containing protein Neighboring gene Neuropeptide-Like Protein;Toxin Neighboring gene pseudo

    Bibliography

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein kinase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in cell cycle IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of mitotic cell cycle IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of mitotic nuclear division IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of mitotic spindle organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in kinetochore IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    Protein aurora borealis
    NP_001254433.1
    • Confirmed by transcript evidence
    NP_001254434.1
    • Confirmed by transcript evidence
    NP_001293534.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      14528752..14534174
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001267504.3NP_001254433.1  Protein aurora borealis [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001254433.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2FLK2
      Conserved Domains (1) summary
      pfam15280
      Location:84327
      BORA_N; Protein aurora borealis N-terminus
    2. NM_001267505.2NP_001254434.1  Protein aurora borealis [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001254434.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5ECT7
      Conserved Domains (1) summary
      pfam15280
      Location:84325
      BORA_N; Protein aurora borealis N-terminus
    3. NM_001306605.1NP_001293534.1  Protein aurora borealis [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293534.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      U4PB03