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    fbxa-140 F-box domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 173166, updated on 18-Sep-2024

    Summary

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    Official Symbol
    fbxa-140
    Official Full Name
    F-box domain-containing protein
    Primary source
    WormBase:WBGene00008130
    Locus tag
    CELE_C47B2.1
    See related
    AllianceGenome:WB:WBGene00008130
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See fbxa-140 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    4
    Sequence:
    Chromosome: I; NC_003279.8 (12960313..12961619, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Galactoside 2-alpha-L-fucosyltransferase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene DUF38 domain-containing protein Neighboring gene Uracil phosphoribosyltransferase homolog Neighboring gene Tubulin alpha-2 chain

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The F-box protein family. Kipreos ET, et al. Genome Biol, 2000. PMID 11178263, Free PMC Article
    2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    General protein information

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    Preferred Names
    F-box domain-containing protein
    NP_001361875.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      12960313..12961619 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001375234.3 → NP_001361875.1  F-box domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      O62104
      Conserved Domains (2) summary
      pfam01827
      Location:136 → 295
      FTH; FTH domain
      cd22150
      Location:1 → 40
      F-box_CeFBXA-like; F-box domain found in Caenorhabditis elegans F-box domain-containing proteins (CeFBXA) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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