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    srj-9 Serpentine Receptor, class J [ Caenorhabditis elegans ]

    Gene ID: 191934, updated on 9-Dec-2024

    Summary

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    Official Symbol
    srj-9
    Official Full Name
    Serpentine Receptor, class J
    Primary source
    WormBase:WBGene00005597
    Locus tag
    CELE_T20C4.1
    See related
    AllianceGenome:WB:WBGene00005597
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See srj-9 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    7
    Sequence:
    Chromosome: V; NC_003283.11 (3431940..3433751)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Serpentine Receptor, class AB (Class A-like) Neighboring gene DUF19 domain-containing protein;Secreted protein Neighboring gene Frizzled-2 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine Receptor, class J
    NP_001309651.1
    • Confirmed by transcript evidence
    NP_001309652.1
    • Confirmed by transcript evidence
    NP_001309653.1
    • Confirmed by transcript evidence
    NP_503963.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      3431940..3433751
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_071562.2 → NP_503963.1  Serpentine Receptor, class J [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_503963.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9UAW7
      Conserved Domains (1) summary
      pfam10319
      Location:2 → 313
      7TM_GPCR_Srj; Serpentine type 7TM GPCR chemoreceptor Srj

    2. NM_001322515.1 → NP_001309651.1  Serpentine Receptor, class J [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A131MD33
      Conserved Domains (1) summary
      cl22924
      Location:2 → 188
      7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd

    3. NM_001322516.1 → NP_001309653.1  Serpentine Receptor, class J [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A131MB81
      Conserved Domains (1) summary
      cl22924
      Location:1 → 221
      7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd

    4. NM_001322517.1 → NP_001309652.1  Serpentine Receptor, class J [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A131MBS1
      Conserved Domains (1) summary
      cl22924
      Location:1 → 96
      7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd
    Nucleotide Protein
    Heading Accession and Version

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