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    zip-1 BZIP domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 176656, updated on 9-Dec-2024

    Summary

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    Official Symbol
    zip-1
    Official Full Name
    BZIP domain-containing protein
    Primary source
    WormBase:WBGene00006986
    Locus tag
    CELE_Y75B8A.35
    See related
    AllianceGenome:WB:WBGene00006986
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable DNA binding activity. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See zip-1 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    7
    Sequence:
    Chromosome: III; NC_003281.10 (12336907..12345348)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein Neighboring gene BZIP domain-containing protein Neighboring gene ncRNA Neighboring gene Serine/threonine-protein phosphatase 4 catalytic subunit 1 Neighboring gene FAM172 family protein homolog Y75B8A.31 Neighboring gene BZIP domain-containing protein Neighboring gene Serpentine receptor class gamma

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Caenorhabditis elegans immune responses to microsporidia and viruses. González R, et al. Dev Comp Immunol, 2024 May. PMID 38325500
    2. RNA Fluorescence in situ Hybridization (FISH) to Visualize Microbial Colonization and Infection in Caenorhabditis elegans Intestines. Rivera DE, et al. J Vis Exp, 2022 Jul 27. PMID 35969095, Free PMC Article
    3. A pals-25 gain-of-function allele triggers systemic resistance against natural pathogens of C. elegans. Gang SS, et al. PLoS Genet, 2022 Oct. PMID 36191002, Free PMC Article
    4. Interference between the PHA-4 and PEB-1 transcription factors in formation of the Caenorhabditis elegans pharynx. Kalb JM, et al. J Mol Biol, 2002 Jul 19. PMID 12095247
    5. Caenorhabditis elegans algn-2 Is Critical for Longevity Conferred by Enhanced Nonsense-Mediated mRNA Decay. Kim EJE, et al. iScience, 2020 Nov 20. PMID 33225240, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    BZIP domain-containing protein
    NP_001293607.1
    • Confirmed by transcript evidence
    NP_001369825.1
    • Confirmed by transcript evidence
    NP_499602.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      12336907..12345348
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_067201.7 → NP_499602.3  BZIP domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_499602.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U1S5, Q9Y0B9

    2. NM_001383010.2 → NP_001369825.1  BZIP domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EE45, Q9Y0B9

    3. NM_001306678.3 → NP_001293607.1  BZIP domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293607.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      S6FWP2
    Nucleotide Protein
    Heading Accession and Version

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