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    fbxb-3 F-box domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 185478, updated on 18-Sep-2024

    Summary

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    Official Symbol
    fbxb-3
    Official Full Name
    F-box domain-containing protein
    Primary source
    WormBase:WBGene00009546
    Locus tag
    CELE_F38H4.2
    See related
    AllianceGenome:WB:WBGene00009546
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See fbxb-3 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    2
    Sequence:
    Chromosome: IV; NC_003282.8 (11838957..11840426)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene LEDGF domain-containing protein Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene BMERB domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. E3 ubiquitin ligases promote progression of differentiation during C. elegans embryogenesis. Du Z, et al. Dev Biol, 2015 Feb 15. PMID 25523393, Free PMC Article
    2. DOT-1.1 (DOT1L) deficiency in C. elegans leads to small RNA-dependent gene activation. Liontis T, et al. BBA Adv, 2023. PMID 37082252, Free PMC Article
    3. The F-box protein family. Kipreos ET, et al. Genome Biol, 2000. PMID 11178263, Free PMC Article
    4. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    5. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    F-box domain-containing protein
    NP_502240.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      11838957..11840426
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069839.4 → NP_502240.1  F-box domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_502240.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20182
      Conserved Domains (2) summary
      pfam00646
      Location:8 → 55
      F-box; F-box domain
      pfam07735
      Location:210 → 277
      FBA_2; F-box associated
    Nucleotide Protein
    Heading Accession and Version

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