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    F56A8.9 CAB39 protein [ Caenorhabditis elegans ]

    Gene ID: 13191724, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F56A8.9
    Official Full Name
    CAB39 protein
    Primary source
    WormBase:WBGene00185001
    Locus tag
    CELE_F56A8.9
    See related
    AllianceGenome:WB:WBGene00185001
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Human ortholog(s) of this gene implicated in osteogenesis imperfecta. Orthologous to human CCDC134 (coiled-coil domain containing 134). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F56A8.9 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    5
    Sequence:
    Chromosome: III; NC_003281.10 (13254675..13256464)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene 2-oxoisovalerate dehydrogenase subunit alpha Neighboring gene Anoctamin Neighboring gene Leucine-rich repeat domain, L domain-like;Transmembrane protein Neighboring gene F-box domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    CAB39 protein
    NP_001255192.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      13254675..13256464
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001268263.2 → NP_001255192.1  CAB39 protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255192.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C0P287
      Conserved Domains (1) summary
      pfam15002
      Location:39 → 231
      ERK-JNK_inhib; ERK and JNK pathways, inhibitor
    Nucleotide Protein
    Heading Accession and Version

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