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    idpc-2 Intrinsically Disordered Protein, class C [ Caenorhabditis elegans ]

    Gene ID: 179245, updated on 9-Dec-2024

    Summary

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    Official Symbol
    idpc-2
    Official Full Name
    Intrinsically Disordered Protein, class C
    Primary source
    WormBase:WBGene00018292
    Locus tag
    CELE_F41E6.11
    See related
    AllianceGenome:WB:WBGene00018292
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Involved in endoplasmic reticulum unfolded protein response. Acts upstream of or within IRE1-mediated unfolded protein response. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See idpc-2 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    3
    Sequence:
    Chromosome: V; NC_003283.11 (8619925..8621313, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Ground-like domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene Protein quiver Neighboring gene DUF19 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A survival pathway for Caenorhabditis elegans with a blocked unfolded protein response. Urano F, et al. J Cell Biol, 2002 Aug 19. PMID 12186849, Free PMC Article
    2. A spatiotemporal reconstruction of the C. elegans pharyngeal cuticle reveals a structure rich in phase-separating proteins. Kamal M, et al. Elife, 2022 Oct 19. PMID 36259463, Free PMC Article
    3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    acts_upstream_of_or_within IRE1-mediated unfolded protein response HEP PubMed 
    involved_in endoplasmic reticulum unfolded protein response HEP PubMed 

    General protein information

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    Preferred Names
    Intrinsically Disordered Protein, class C
    NP_505224.1
    • Confirmed by transcript evidence;
      Product from WormBase gene class idpc

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      8619925..8621313 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_072823.5 → NP_505224.1  Intrinsically Disordered Protein, class C [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_505224.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O16463
    Nucleotide Protein
    Heading Accession and Version

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