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    sst-20 Sperm Specific Transcript [ Caenorhabditis elegans ]

    Gene ID: 172125, updated on 9-Dec-2024

    Summary

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    Official Symbol
    sst-20
    Official Full Name
    Sperm Specific Transcript
    Primary source
    WormBase:WBGene00006058
    Locus tag
    CELE_F54C1.9
    See related
    AllianceGenome:WB:WBGene00006058
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See sst-20 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    4
    Sequence:
    Chromosome: I; NC_003279.8 (5006706..5008050)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Polycomb protein mes-3 Neighboring gene Decapping nuclease dom-3 Neighboring gene Uncharacterized protein Neighboring gene glucuronosyltransferase Neighboring gene Protein-serine/threonine phosphatase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. GLD-1, a cytoplasmic protein essential for oocyte differentiation, shows stage- and sex-specific expression during Caenorhabditis elegans germline development. Jones AR, et al. Dev Biol, 1996 Nov 25. PMID 8948583
    2. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Sperm Specific Transcript
    NP_001379811.1
    • Product from WormBase gene class sst;
      Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      5006706..5008050
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001392247.1 → NP_001379811.1  Sperm Specific Transcript [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9TXJ7
    Nucleotide Protein
    Heading Accession and Version

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