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    • Showing Current items.

    srh-39 Serpentine Receptor, class H [ Caenorhabditis elegans ]

    Gene ID: 191858, updated on 9-Dec-2024

    Summary

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    Official Symbol
    srh-39
    Official Full Name
    Serpentine Receptor, class H
    Primary source
    WormBase:WBGene00005262
    Locus tag
    CELE_C06A8.7
    See related
    AllianceGenome:WB:WBGene00005262
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See srh-39 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    6
    Sequence:
    Chromosome: II; NC_003280.10 (7763763..7765556, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein Neighboring gene Centrosomal protein CEP104 N-terminal domain-containing protein;DUF2040 domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene U2A'/phosphoprotein 32 family A C-terminal domain-containing protein Neighboring gene putative methylenetetrahydrofolate reductase (NADPH)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The large srh family of chemoreceptor genes in Caenorhabditis nematodes reveals processes of genome evolution involving large duplications and deletions and intron gains and losses. Robertson HM. Genome Res, 2000 Feb. PMID 10673277
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine Receptor, class H
    NP_495632.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      7763763..7765556 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063231.2 → NP_495632.1  Serpentine Receptor, class H [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495632.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q17690
      Conserved Domains (1) summary
      pfam10318
      Location:11 → 308
      7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh
    Nucleotide Protein
    Heading Accession and Version

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