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    spe-17 Spermatogenesis-defective protein spe-17 [ Caenorhabditis elegans ]

    Gene ID: 178136, updated on 9-Dec-2024

    Summary

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    Official Symbol
    spe-17
    Official Full Name
    Spermatogenesis-defective protein spe-17
    Primary source
    WormBase:WBGene00004971
    Locus tag
    CELE_ZK617.3
    See related
    AllianceGenome:WB:WBGene00004971
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Involved in spermatid development. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See spe-17 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    3
    Sequence:
    Chromosome: IV; NC_003282.8 (12013420..12014050)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Twitchin Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene LIPaSe related Neighboring gene Trans-Golgi network integral membrane protein 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and molecular characterization of the Caenorhabditis elegans spermatogenesis-defective gene spe-17. L'Hernault SW, et al. Genetics, 1993 Jul. PMID 8349108, Free PMC Article
    2. Male reproductive toxicity involved in spermatogenesis induced by perfluorooctane sulfonate and perfluorooctanoic acid in Caenorhabditis elegans. Yin J, et al. Environ Sci Pollut Res Int, 2021 Jan. PMID 32839910
    3. Spermatogenesis. L'Hernault SW. WormBook, 2006 Feb 20. PMID 18050478, Free PMC Article
    4. A global profile of germline gene expression in C. elegans. Reinke V, et al. Mol Cell, 2000 Sep. PMID 11030340
    5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in spermatid development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in spermatogenesis IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Spermatogenesis-defective protein spe-17
    NP_502275.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      12013420..12014050
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069874.5 → NP_502275.1  Spermatogenesis-defective protein spe-17 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_502275.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P34890, Q23549
    Nucleotide Protein
    Heading Accession and Version

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