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    vep-1 Myb-like domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 172168, updated on 9-Dec-2024

    Summary

    Official Symbol
    vep-1
    Official Full Name
    Myb-like domain-containing protein
    Primary source
    WormBase:WBGene00015091
    Locus tag
    CELE_B0261.1
    See related
    AllianceGenome:WB:WBGene00015091
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable TFIIIC-class transcription factor complex binding activity. Predicted to be involved in RNA polymerase III preinitiation complex assembly. Predicted to be part of transcription factor TFIIIB complex. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 112. Orthologous to human BDP1 (B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See vep-1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    9
    Sequence:
    Chromosome: I; NC_003279.8 (5263694..5268380)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Target of rapamycin homolog Neighboring gene Uncharacterized protein Neighboring gene DUF4015 domain-containing protein;DUF4968 domain-containing protein Neighboring gene DUF4377 domain-containing protein Neighboring gene Zf-tcix domain-containing protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables TFIIIC-class transcription factor complex binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in RNA polymerase III preinitiation complex assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    part_of transcription factor TFIIIB complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    Myb-like domain-containing protein
    NP_491553.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      5263694..5268380
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_059152.9NP_491553.1  Myb-like domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_491553.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O01441
      Conserved Domains (3) summary
      PTZ00121
      Location:339504
      PTZ00121; MAEBL; Provisional
      COG5118
      Location:43375
      BDP1; Transcription initiation factor TFIIIB, Bdp1 subunit [Transcription]
      pfam15963
      Location:259340
      Myb_DNA-bind_7; Myb DNA-binding like