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    Zfp1009 zinc finger protein 1009 [ Mus musculus (house mouse) ]

    Gene ID: 100503353, updated on 27-Nov-2024

    Summary

    Official Symbol
    Zfp1009provided by MGI
    Official Full Name
    zinc finger protein 1009provided by MGI
    Primary source
    MGI:MGI:3702430
    See related
    Ensembl:ENSMUSG00000078901 AllianceGenome:MGI:3702430
    Gene type
    protein coding
    RefSeq status
    INFERRED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm14440
    Expression
    Broad expression in bladder adult (RPKM 5.5), cerebellum adult (RPKM 4.9) and 23 other tissues See more
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    Genomic context

    See Zfp1009 in Genome Data Viewer
    Location:
    2 H4; 2 98.35 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (175116918..175128598)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (175275125..175286805)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene predicted gene 14391 Neighboring gene STARR-positive B cell enhancer mm9_chr2:175032331-175032631 Neighboring gene predicted gene 14438 Neighboring gene predicted gene 4631 Neighboring gene STARR-positive B cell enhancer mm9_chr2:175197770-175198071 Neighboring gene zinc finger protein 968

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    KRAB box containing protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001199308.1NP_001186237.1  KRAB box containing protein

      See identical proteins and their annotated locations for NP_001186237.1

      Status: INFERRED

      Source sequence(s)
      BX000464
      Consensus CDS
      CCDS84589.1
      UniProtKB/TrEMBL
      A2ARV8, A2BDM8
      Related
      ENSMUSP00000104679.2, ENSMUST00000109051.8
      Conserved Domains (1) summary
      pfam01352
      Location:443
      KRAB; KRAB box

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      175116918..175128598
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)