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    Prr29 proline rich 29 [ Mus musculus (house mouse) ]

    Gene ID: 75573, updated on 9-Dec-2024

    Summary

    Official Symbol
    Prr29provided by MGI
    Official Full Name
    proline rich 29provided by MGI
    Primary source
    MGI:MGI:1922823
    See related
    Ensembl:ENSMUSG00000009210 AllianceGenome:MGI:1922823
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2310007L24Rik
    Summary
    Orthologous to human PRR29 (proline rich 29). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in ovary adult (RPKM 17.3), lung adult (RPKM 9.1) and 4 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Prr29 in Genome Data Viewer
    Location:
    11 E1; 11 69.05 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (106255838..106267940)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (106374762..106377114)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E10721 Neighboring gene STARR-seq mESC enhancer starr_30919 Neighboring gene STARR-positive B cell enhancer ABC_E7081 Neighboring gene growth hormone Neighboring gene CD79B antigen Neighboring gene sodium channel, voltage-gated, type IV, alpha Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:106235839-106236093 Neighboring gene STARR-positive B cell enhancer ABC_E10722 Neighboring gene intercellular adhesion molecule 2 Neighboring gene endoplasmic reticulum to nucleus signalling 1 Neighboring gene STARR-positive B cell enhancer ABC_E9845 Neighboring gene STARR-positive B cell enhancer ABC_E10723 Neighboring gene STARR-positive B cell enhancer ABC_E7082

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    proline-rich protein 29
    NP_083621.1
    XP_006534451.1
    XP_036012949.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_029345.1NP_083621.1  proline-rich protein 29

      See identical proteins and their annotated locations for NP_083621.1

      Status: VALIDATED

      Source sequence(s)
      AK009213, AK153786, BC116233
      Consensus CDS
      CCDS48962.1
      UniProtKB/Swiss-Prot
      B1ARI9, Q9D7I4
      UniProtKB/TrEMBL
      A0A087WQW1
      Related
      ENSMUSP00000102429.2, ENSMUST00000106816.8
      Conserved Domains (1) summary
      pfam15248
      Location:4287
      DUF4587; Domain of unknown function (DUF4587)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      106255838..106267940
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036157056.1XP_036012949.1  proline-rich protein 29 isoform X1

      Related
      ENSMUSP00000009354.4, ENSMUST00000009354.10
      Conserved Domains (1) summary
      pfam15248
      Location:159
      DUF4587; Domain of unknown function (DUF4587)
    2. XM_006534388.3XP_006534451.1  proline-rich protein 29 isoform X2

      UniProtKB/TrEMBL
      A0A087WQH2
      Related
      ENSMUSP00000140194.2, ENSMUST00000188561.7
      Conserved Domains (1) summary
      pfam15248
      Location:4288
      DUF4587; Domain of unknown function (DUF4587)