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    Fastk Fas-activated serine/threonine kinase [ Mus musculus (house mouse) ]

    Gene ID: 66587, updated on 27-Nov-2024

    Summary

    Official Symbol
    Fastkprovided by MGI
    Official Full Name
    Fas-activated serine/threonine kinaseprovided by MGI
    Primary source
    MGI:MGI:1913837
    See related
    Ensembl:ENSMUSG00000028959 AllianceGenome:MGI:1913837
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    610011K02Rik; 0610011K02Rik
    Summary
    Predicted to enable RNA binding activity and protein serine/threonine kinase activity. Predicted to be involved in mitochondrial RNA processing; protein phosphorylation; and regulation of gene expression. Located in nuclear speck. Is expressed in brain; gut; male reproductive gland or organ; metanephros; and thoracic segment skeleton. Orthologous to human FASTK (Fas activated serine/threonine kinase). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in heart adult (RPKM 133.9), colon adult (RPKM 87.0) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Fastk in Genome Data Viewer
    Location:
    5 A3; 5 11.78 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (24646036..24650280, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (24441038..24445295, complement)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene cyclin dependent kinase 5 Neighboring gene acid-sensing ion channel 3 Neighboring gene STARR-positive B cell enhancer ABC_E9251 Neighboring gene solute carrier family 4 (anion exchanger), member 2 Neighboring gene predicted gene, 22333 Neighboring gene transmembrane and ubiquitin-like domain containing 1 Neighboring gene ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 Neighboring gene VISTA enhancer mm1191

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Gene trapped (1) 
    • Targeted (3)  1 citation

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables Fas-activated serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein serine kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein serine/threonine kinase activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in mitochondrial RNA processing IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein phosphorylation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of RNA splicing ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of mitochondrial mRNA stability IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of mitochondrial mRNA stability IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in mitochondrial matrix IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrial matrix IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrion HDA PubMed 
    located_in nuclear speck IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in ribonucleoprotein granule IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    fas-activated serine/threonine kinase
    Names
    FAST kinase
    NP_075718.2
    XP_017176555.1
    XP_017176556.1
    XP_030110621.1
    XP_036021302.1
    XP_036021303.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_023229.2NP_075718.2  fas-activated serine/threonine kinase

      See identical proteins and their annotated locations for NP_075718.2

      Status: VALIDATED

      Source sequence(s)
      AK152369
      Consensus CDS
      CCDS19120.1
      UniProtKB/TrEMBL
      Q8C725, Q8CAK5
      Related
      ENSMUSP00000030800.7, ENSMUST00000030800.13
      Conserved Domains (3) summary
      smart00952
      Location:480532
      RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
      pfam06743
      Location:274339
      FAST_1; FAST kinase-like protein, subdomain 1
      pfam08368
      Location:354439
      FAST_2; FAST kinase-like protein, subdomain 2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      24646036..24650280 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017321066.2XP_017176555.1  fas-activated serine/threonine kinase isoform X1

      UniProtKB/Swiss-Prot
      Q9JIX9
      UniProtKB/TrEMBL
      Q91WQ6
      Conserved Domains (3) summary
      smart00952
      Location:446498
      RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
      pfam06743
      Location:240305
      FAST_1; FAST kinase-like protein, subdomain 1
      pfam08368
      Location:318405
      FAST_2; FAST kinase-like protein, subdomain 2
    2. XM_036165410.1XP_036021303.1  fas-activated serine/threonine kinase isoform X2

      UniProtKB/TrEMBL
      E9QA06
      Conserved Domains (3) summary
      smart00952
      Location:332384
      RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
      pfam06743
      Location:126191
      FAST_1; FAST kinase-like protein, subdomain 1
      pfam08368
      Location:204291
      FAST_2; FAST kinase-like protein, subdomain 2
    3. XM_017321067.3XP_017176556.1  fas-activated serine/threonine kinase isoform X1

      UniProtKB/Swiss-Prot
      Q9JIX9
      UniProtKB/TrEMBL
      Q91WQ6
      Conserved Domains (3) summary
      smart00952
      Location:446498
      RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
      pfam06743
      Location:240305
      FAST_1; FAST kinase-like protein, subdomain 1
      pfam08368
      Location:318405
      FAST_2; FAST kinase-like protein, subdomain 2
    4. XM_036165409.1XP_036021302.1  fas-activated serine/threonine kinase isoform X1

      UniProtKB/Swiss-Prot
      Q9JIX9
      UniProtKB/TrEMBL
      Q91WQ6
      Related
      ENSMUST00000149085.8
      Conserved Domains (3) summary
      smart00952
      Location:446498
      RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
      pfam06743
      Location:240305
      FAST_1; FAST kinase-like protein, subdomain 1
      pfam08368
      Location:318405
      FAST_2; FAST kinase-like protein, subdomain 2
    5. XM_030254761.2XP_030110621.1  fas-activated serine/threonine kinase isoform X2

      UniProtKB/TrEMBL
      E9QA06
      Related
      ENSMUSP00000110693.2, ENSMUST00000115041.2
      Conserved Domains (3) summary
      smart00952
      Location:332384
      RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
      pfam06743
      Location:126191
      FAST_1; FAST kinase-like protein, subdomain 1
      pfam08368
      Location:204291
      FAST_2; FAST kinase-like protein, subdomain 2

    RNA

    1. XR_389748.5 RNA Sequence

    2. XR_003955693.2 RNA Sequence