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    Brd3os BRD3 opposite strand [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100911432, updated on 27-Nov-2024

    Summary

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    Official Symbol
    Brd3osprovided by RGD
    Official Full Name
    BRD3 opposite strandprovided by RGD
    Primary source
    RGD:6492996
    See related
    EnsemblRapid:ENSRNOG00000073669 AllianceGenome:RGD:6492996
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Brain (RPKM 27.4), Adrenal (RPKM 10.2) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Brd3os in Genome Data Viewer
    Location:
    3p12
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (31168289..31169920)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (10770229..10771860)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (5991840..5993910)

    Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102548789 Neighboring gene sarcosine dehydrogenase Neighboring gene vav guanine nucleotide exchange factor 2 Neighboring gene microRNA 7578 Neighboring gene bromodomain containing 3 Neighboring gene small nucleolar RNA SNORA26

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    putative uncharacterized protein BRD3OS

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001400001.1 → NP_001386930.1  putative uncharacterized protein BRD3OS

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000003
      Related
      ENSRNOP00000100975.1, ENSRNOT00000145712.1

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086021.1 Reference GRCr8

      Range
      31168289..31169920
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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