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    LOC102554996 uncharacterized LOC102554996 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 102554996, updated on 17-Aug-2024

    Summary

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    Symbol
    LOC102554996provided by RGD
    Full Name
    uncharacterized LOC102554996provided by RGD
    Primary source
    RGD:7728653
    See related
    AllianceGenome:RGD:7728653
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Kidney (RPKM 28.5), Testes (RPKM 11.8) and 4 other tissues See more
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    Genomic context

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    See LOC102554996 in Genome Data Viewer
    Location:
    9q21
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 9 NC_086027.1 (46828048..46830142, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 9 NC_051344.1 (39332222..39334749, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (43689217..43691733, complement)

    Chromosome 9 - NC_086027.1Genomic Context describing neighboring genes Neighboring gene von Willebrand factor A domain containing 3B Neighboring gene uncharacterized LOC134480356 Neighboring gene transfer RNA alanine (anticodon AGC) 41 Neighboring gene uncharacterized LOC134480357 Neighboring gene cyclic nucleotide gated channel subunit alpha 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086027.1 Reference GRCr8

      Range
      46828048..46830142 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_356973.4 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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