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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001290500.2 → NP_001277429.1 tetratricopeptide repeat protein 14 isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an in-frame exon in the central coding region compared to variant 1. The encoded isoform (c) is shorter than isoform a.
- Source sequence(s)
-
AC154395
- Consensus CDS
-
CCDS71232.1
- UniProtKB/Swiss-Prot
- G3X9T5, Q69Z51, Q8BRX6, Q8CD24, Q8CDF8, Q8R3Q9, Q9CSP9
- UniProtKB/TrEMBL
-
E9PXW3
- Related
- ENSMUSP00000112450.4, ENSMUST00000117915.8
- Conserved Domains (4) summary
-
- smart00316
Location:123 → 206
- S1; Ribosomal protein S1-like RNA-binding domain
- sd00006
Location:254 → 282
- TPR; TPR repeat [structural motif]
- pfam00515
Location:288 → 321
- TPR_1; Tetratricopeptide repeat
- pfam13414
Location:254 → 319
- TPR_11; TPR repeat
-
NM_001290502.2 → NP_001277431.1 tetratricopeptide repeat protein 14 isoform d
See identical proteins and their annotated locations for NP_001277431.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in both UTRs, uses an alternate splice site in the 5' coding region and an alternate 3' terminal exon. These difference cause translation initiation at an alternate start codon compared to variant 1. The encoded isoform (d) is shorter and has novel N- and C-termini compared to isoform a.
- Source sequence(s)
-
AC154395
- Consensus CDS
-
CCDS79895.1
- UniProtKB/TrEMBL
-
A0A0G2JGX7
- Related
- ENSMUSP00000143738.2, ENSMUST00000200271.5
- Conserved Domains (4) summary
-
- smart00316
Location:120 → 203
- S1; Ribosomal protein S1-like RNA-binding domain
- sd00006
Location:303 → 331
- TPR; TPR repeat [structural motif]
- pfam00515
Location:337 → 370
- TPR_1; Tetratricopeptide repeat
- pfam13414
Location:303 → 368
- TPR_11; TPR repeat
-
NM_001404037.1 → NP_001390966.1 tetratricopeptide repeat protein 14 isoform e
Status: VALIDATED
- Source sequence(s)
-
AC154395
- UniProtKB/TrEMBL
-
A0A0G2JEQ6
-
NM_001404038.1 → NP_001390967.1 tetratricopeptide repeat protein 14 isoform e
Status: VALIDATED
- Source sequence(s)
-
AC154395
- UniProtKB/TrEMBL
-
A0A0G2JEQ6
-
NM_001404039.1 → NP_001390968.1 tetratricopeptide repeat protein 14 isoform e
Status: VALIDATED
- Source sequence(s)
-
AC154395
- UniProtKB/TrEMBL
-
A0A0G2JEQ6
- Related
- ENSMUSP00000142863.2, ENSMUST00000196369.2
-
NM_001404040.1 → NP_001390969.1 tetratricopeptide repeat protein 14 isoform f
Status: VALIDATED
- Source sequence(s)
-
AC154395
- UniProtKB/TrEMBL
-
A0A0G2JEQ6
-
NM_001404041.1 → NP_001390970.1 tetratricopeptide repeat protein 14 isoform g
Status: VALIDATED
- Source sequence(s)
-
AC154395
- UniProtKB/TrEMBL
-
A0A0G2JEQ6
-
NM_001404042.1 → NP_001390971.1 tetratricopeptide repeat protein 14 isoform h
Status: VALIDATED
- Source sequence(s)
-
AC154395
- UniProtKB/Swiss-Prot
- G3X9T5, Q69Z51, Q8BRX6, Q8CD24, Q8CDF8, Q8R3Q9, Q9CSP9
-
NM_025978.5 → NP_080254.2 tetratricopeptide repeat protein 14 isoform b
See identical proteins and their annotated locations for NP_080254.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate structure in the 3' UTR and 3' coding region compared to variant 1. The encoded isoform (b) is shorter and has a distinct C-terminus compared to isoform a.
- Source sequence(s)
-
AC154395
- Consensus CDS
-
CCDS17303.1
- UniProtKB/TrEMBL
- A0A0G2JE97, A6H6N9
- Related
- ENSMUSP00000096757.4, ENSMUST00000099153.10
- Conserved Domains (4) summary
-
- smart00316
Location:123 → 206
- S1; Ribosomal protein S1-like RNA-binding domain
- sd00006
Location:306 → 334
- TPR; TPR repeat [structural motif]
- pfam00515
Location:340 → 373
- TPR_1; Tetratricopeptide repeat
- pfam13414
Location:306 → 371
- TPR_11; TPR repeat
-
NM_027619.5 → NP_081895.2 tetratricopeptide repeat protein 14 isoform a
See identical proteins and their annotated locations for NP_081895.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes isoform (a).
- Source sequence(s)
-
AC154395
- Consensus CDS
-
CCDS38410.1
- UniProtKB/Swiss-Prot
- G3X9T5, Q69Z51, Q8BRX6, Q8CD24, Q8CDF8, Q8R3Q9, Q9CSP9
- UniProtKB/TrEMBL
-
A0A8V5I5B0
- Related
- ENSMUSP00000103845.5, ENSMUST00000108210.9
- Conserved Domains (4) summary
-
- smart00316
Location:123 → 206
- S1; Ribosomal protein S1-like RNA-binding domain
- sd00006
Location:306 → 334
- TPR; TPR repeat [structural motif]
- pfam00515
Location:340 → 373
- TPR_1; Tetratricopeptide repeat
- pfam13414
Location:306 → 371
- TPR_11; TPR repeat
RNA
-
NR_175794.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC154395
-
NR_175795.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC154395
-
NR_175796.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC154395
-
NR_175797.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC154395
-
NR_175798.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC154395
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000069.7 Reference GRCm39 C57BL/6J
- Range
-
33853923..33869009
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_036163240.1 → XP_036019133.1 tetratricopeptide repeat protein 14 isoform X7
- UniProtKB/TrEMBL
- A0A0G2JEX0, A0A0G2JF90
- Related
- ENSMUSP00000142935.2, ENSMUST00000199222.5
- Conserved Domains (3) summary
-
- smart00316
Location:123 → 206
- S1; Ribosomal protein S1-like RNA-binding domain
- COG0457
Location:289 → 430
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:306 → 334
- TPR; TPR repeat [structural motif]
-
XM_006535522.4 → XP_006535585.1 tetratricopeptide repeat protein 14 isoform X1
- UniProtKB/Swiss-Prot
- G3X9T5, Q69Z51, Q8BRX6, Q8CD24, Q8CDF8, Q8R3Q9, Q9CSP9
- Conserved Domains (3) summary
-
- smart00316
Location:154 → 237
- S1; Ribosomal protein S1-like RNA-binding domain
- COG0457
Location:256 → 415
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:285 → 313
- TPR; TPR repeat [structural motif]
-
XM_011249707.4 → XP_011248009.1 tetratricopeptide repeat protein 14 isoform X6
- UniProtKB/TrEMBL
-
A0A0G2JF90
- Conserved Domains (3) summary
-
- smart00316
Location:154 → 237
- S1; Ribosomal protein S1-like RNA-binding domain
- COG0457
Location:320 → 461
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:337 → 365
- TPR; TPR repeat [structural motif]
-
XM_011249706.4 → XP_011248008.1 tetratricopeptide repeat protein 14 isoform X5
- UniProtKB/TrEMBL
-
A0A0G2JF90
- Conserved Domains (3) summary
-
- smart00316
Location:154 → 237
- S1; Ribosomal protein S1-like RNA-binding domain
- COG0457
Location:320 → 473
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:337 → 365
- TPR; TPR repeat [structural motif]
-
XM_036163238.1 → XP_036019131.1 tetratricopeptide repeat protein 14 isoform X3
- Conserved Domains (3) summary
-
- COG0457
Location:75 → 222
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:92 → 120
- TPR; TPR repeat [structural motif]
- pfam13414
Location:102 → 140
- TPR_11; TPR repeat
-
XM_030252768.2 → XP_030108628.1 tetratricopeptide repeat protein 14 isoform X4
- Conserved Domains (3) summary
-
- COG0457
Location:11 → 170
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:40 → 68
- TPR; TPR repeat [structural motif]
- pfam13414
Location:50 → 88
- TPR_11; TPR repeat
RNA
-
XR_880651.4 RNA Sequence