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    Acbd4 acyl-Coenzyme A binding domain containing 4 [ Mus musculus (house mouse) ]

    Gene ID: 67131, updated on 9-Dec-2024

    Summary

    Official Symbol
    Acbd4provided by MGI
    Official Full Name
    acyl-Coenzyme A binding domain containing 4provided by MGI
    Primary source
    MGI:MGI:1914381
    See related
    Ensembl:ENSMUSG00000056938 AllianceGenome:MGI:1914381
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2010009P05Rik; 2010015A21Rik
    Summary
    Predicted to enable fatty-acyl-CoA binding activity. Predicted to be involved in fatty acid metabolic process. Predicted to be active in cytoplasm. Is expressed in liver and liver lobe. Orthologous to human ACBD4 (acyl-CoA binding domain containing 4). [provided by Alliance of Genome Resources, Dec 2024]
    Annotation information
    Annotation category: suggests misassembly
    Note: Genetic polymorphisms result in both protein coding and non-coding alleles of this gene.
    Expression
    Broad expression in duodenum adult (RPKM 33.3), subcutaneous fat pad adult (RPKM 30.6) and 23 other tissues See more
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    Genomic context

    See Acbd4 in Genome Data Viewer
    Location:
    11 E1; 11 66.71 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (102992524..103003026)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (103101688..103112199)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene N-myristoyltransferase 1 Neighboring gene predicted gene, 42090 Neighboring gene phospholipase C, delta 3 Neighboring gene STARR-seq mESC enhancer starr_30831 Neighboring gene STARR-positive B cell enhancer ABC_E204 Neighboring gene STARR-positive B cell enhancer ABC_E4004 Neighboring gene STARR-positive B cell enhancer ABC_E738 Neighboring gene hexamethylene bis-acetamide inducible 1 Neighboring gene hexamethylene bis-acetamide inducible 2 Neighboring gene STARR-positive B cell enhancer ABC_E379

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General protein information

    Preferred Names
    acyl-CoA-binding domain-containing protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025988.3NP_080264.1  acyl-CoA-binding domain-containing protein 4

      See identical proteins and their annotated locations for NP_080264.1

      Status: VALIDATED

      Source sequence(s)
      AL731805, BB863821
      UniProtKB/TrEMBL
      A2AHR2, Q80X94
      Conserved Domains (1) summary
      pfam00887
      Location:1191
      ACBP; Acyl CoA binding protein

    RNA

    1. NR_169793.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL731805
      Related
      ENSMUST00000107040.10

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      102992524..103003026
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001081495.1: Suppressed sequence

      Description
      NM_001081495.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.