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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001198785.1 → NP_001185714.1 serine/threonine-protein kinase LMTK1 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and contains an in-frame upstream start codon compared to variant 1. This variant encodes a protein (isoform 2) with a longer N-terminus than isoform 1.
- Source sequence(s)
-
AB288871, BC042837, BC080846
- Consensus CDS
-
CCDS56826.1
- UniProtKB/Swiss-Prot
- A6BLY8, O35211, Q3U2U5, Q3UHR8, Q66JN3, Q80YE3, Q80YE4, Q8CB63, Q8CHE2
- UniProtKB/TrEMBL
-
B1AZF3
- Related
- ENSMUSP00000067181.4, ENSMUST00000064307.10
- Conserved Domains (3) summary
-
- smart00221
Location:138 → 405
- STYKc; Protein kinase; unclassified specificity
- cd05087
Location:137 → 407
- PTKc_Aatyk1; Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinase 1
- pfam12429
Location:828 → 880
- DUF3676; Protein of unknown function (DUF3676)
-
NM_001198787.1 → NP_001185716.1 serine/threonine-protein kinase LMTK1 isoform 1
See identical proteins and their annotated locations for NP_001185716.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, compared to variant, and encodes isoform 1. Variants 1 and 3 encode the same protein (isoform 1).
- Source sequence(s)
-
AK036705, BC080846
- Consensus CDS
-
CCDS25725.1
- UniProtKB/Swiss-Prot
- A6BLY8, O35211, Q3U2U5, Q3UHR8, Q66JN3, Q80YE3, Q80YE4, Q8CB63, Q8CHE2
- UniProtKB/TrEMBL
-
B1AZF9
- Related
- ENSMUSP00000099308.2, ENSMUST00000103019.2
- Conserved Domains (3) summary
-
- smart00221
Location:81 → 348
- STYKc; Protein kinase; unclassified specificity
- cd05087
Location:80 → 350
- PTKc_Aatyk1; Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinase 1
- pfam12429
Location:771 → 823
- DUF3676; Protein of unknown function (DUF3676)
-
NM_001377503.1 → NP_001364432.1 serine/threonine-protein kinase LMTK1 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AL953913
- UniProtKB/Swiss-Prot
- A6BLY8, O35211, Q3U2U5, Q3UHR8, Q66JN3, Q80YE3, Q80YE4, Q8CB63, Q8CHE2
- Conserved Domains (2) summary
-
- PHA03307
Location:473 → 904
- PHA03307; transcriptional regulator ICP4; Provisional
- cl21453
Location:1 → 230
- PKc_like; Protein Kinases, catalytic domain
-
NM_001402789.1 → NP_001389718.1 serine/threonine-protein kinase LMTK1 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AL953913
- UniProtKB/Swiss-Prot
- A6BLY8, O35211, Q3U2U5, Q3UHR8, Q66JN3, Q80YE3, Q80YE4, Q8CB63, Q8CHE2
-
NM_007377.4 → NP_031403.2 serine/threonine-protein kinase LMTK1 isoform 1
See identical proteins and their annotated locations for NP_031403.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes isoform 1. Variants 1 and 3 encode the same protein (isoform 1).
- Source sequence(s)
-
BC042837, BC080846
- Consensus CDS
-
CCDS25725.1
- UniProtKB/Swiss-Prot
- A6BLY8, O35211, Q3U2U5, Q3UHR8, Q66JN3, Q80YE3, Q80YE4, Q8CB63, Q8CHE2
- UniProtKB/TrEMBL
-
B1AZF9
- Related
- ENSMUSP00000099309.2, ENSMUST00000103020.8
- Conserved Domains (3) summary
-
- smart00221
Location:81 → 348
- STYKc; Protein kinase; unclassified specificity
- cd05087
Location:80 → 350
- PTKc_Aatyk1; Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinase 1
- pfam12429
Location:771 → 823
- DUF3676; Protein of unknown function (DUF3676)
RNA
-
NR_165305.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL953913
-
NR_165306.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL953913
-
NR_175298.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL953913
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000077.7 Reference GRCm39 C57BL/6J
- Range
-
119898137..119938009 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006531991.3 → XP_006532054.1 serine/threonine-protein kinase LMTK1 isoform X1
- UniProtKB/Swiss-Prot
- A6BLY8, O35211, Q3U2U5, Q3UHR8, Q66JN3, Q80YE3, Q80YE4, Q8CB63, Q8CHE2
- Conserved Domains (2) summary
-
- PHA03307
Location:650 → 1081
- PHA03307; transcriptional regulator ICP4; Provisional
- cd05087
Location:137 → 407
- PTKc_Aatyk1; Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinase 1
-
XM_006531993.3 → XP_006532056.1 serine/threonine-protein kinase LMTK1 isoform X4
See identical proteins and their annotated locations for XP_006532056.1
- UniProtKB/Swiss-Prot
- A6BLY8, O35211, Q3U2U5, Q3UHR8, Q66JN3, Q80YE3, Q80YE4, Q8CB63, Q8CHE2
- Related
-
ENSMUST00000150730.8
- Conserved Domains (2) summary
-
- PHA03307
Location:593 → 1024
- PHA03307; transcriptional regulator ICP4; Provisional
- cd05087
Location:80 → 350
- PTKc_Aatyk1; Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinase 1
-
XM_006531994.4 → XP_006532057.1 serine/threonine-protein kinase LMTK1 isoform X4
See identical proteins and their annotated locations for XP_006532057.1
- UniProtKB/Swiss-Prot
- A6BLY8, O35211, Q3U2U5, Q3UHR8, Q66JN3, Q80YE3, Q80YE4, Q8CB63, Q8CHE2
- Conserved Domains (2) summary
-
- PHA03307
Location:593 → 1024
- PHA03307; transcriptional regulator ICP4; Provisional
- cd05087
Location:80 → 350
- PTKc_Aatyk1; Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinase 1
-
XM_006531992.5 → XP_006532055.1 serine/threonine-protein kinase LMTK1 isoform X2
- UniProtKB/Swiss-Prot
- A6BLY8, O35211, Q3U2U5, Q3UHR8, Q66JN3, Q80YE3, Q80YE4, Q8CB63, Q8CHE2
- Conserved Domains (2) summary
-
- PHA03307
Location:601 → 1032
- PHA03307; transcriptional regulator ICP4; Provisional
- cd05087
Location:88 → 358
- PTKc_Aatyk1; Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinase 1
-
XM_036156231.1 → XP_036012124.1 serine/threonine-protein kinase LMTK1 isoform X5
- Related
-
ENSMUST00000142959.2
- Conserved Domains (1) summary
-
- PHA03307
Location:240 → 671
- PHA03307; transcriptional regulator ICP4; Provisional
RNA
-
XR_003949229.1 RNA Sequence