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    EDDM3B epididymal protein 3B [ Homo sapiens (human) ]

    Gene ID: 64184, updated on 10-Dec-2024

    Summary

    Official Symbol
    EDDM3Bprovided by HGNC
    Official Full Name
    epididymal protein 3Bprovided by HGNC
    Primary source
    HGNC:HGNC:19223
    See related
    Ensembl:ENSG00000181552 MIM:611582; AllianceGenome:HGNC:19223
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    EP3B; HE3B; RAM2; FAM12B; HE3-BETA
    Summary
    Testicular sperm are morphologically differentiated but are not progressively motile nor able to fertilize an egg. Post-testicular maturation requires exposure of spermatozoa to the microenvironment of the epididymal lumen. Spermatozoa undergo extensive changes in the epididymis, including enzymatic modifications, loss of pre-existing components and addition of new glycoproteins from epididymal secretions. These modifying proteins and enzymes are synthesized by epithelial cells lining the epididymal duct and secreted apically into the lumen, where they come into contact with, and may be absorbed onto, the sperm membranes. The proteins encoded by the genes in this cluster are synthesized and secreted by epididymal epithelial cells. [provided by RefSeq, Jul 2008]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
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    Genomic context

    See EDDM3B in Genome Data Viewer
    Location:
    14q11.2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (20768404..20770948)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (14965518..14968062)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (21236563..21239107)

    Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984671 Neighboring gene epididymal protein 3D, pseudogene Neighboring gene epididymal protein 3A Neighboring gene MED14-independent group 3 enhancer GRCh37_chr14:21219442-21220641 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8094 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr14:21240614-21241376 Neighboring gene NANOG hESC enhancer GRCh37_chr14:21243094-21243697 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8095 Neighboring gene ribonuclease A family member 6 Neighboring gene uncharacterized LOC105370397 Neighboring gene ribonuclease A family member 1, pancreatic

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    epididymal secretory protein E3-beta
    Names
    family with sequence similarity 12, member B (epididymal)
    human epididymis-specific 3 beta
    human epididymis-specific protein 3-beta
    ribonuclease A M2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_022360.5NP_071755.1  epididymal secretory protein E3-beta precursor

      See identical proteins and their annotated locations for NP_071755.1

      Status: VALIDATED

      Source sequence(s)
      AI075915, AL163636, AY358865, BX112699
      Consensus CDS
      CCDS9557.1
      UniProtKB/Swiss-Prot
      A0PK89, P56851
      UniProtKB/TrEMBL
      W0UV31
      Related
      ENSP00000314810.3, ENST00000326783.4

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

      Range
      20768404..20770948
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060938.1 Alternate T2T-CHM13v2.0

      Range
      14965518..14968062
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)