U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Prss1l serine protease 1 (trypsin 1) like [ Mus musculus (house mouse) ]

    Gene ID: 436523, updated on 9-Dec-2024

    Summary

    Official Symbol
    Prss1lprovided by MGI
    Official Full Name
    serine protease 1 (trypsin 1) likeprovided by MGI
    Primary source
    MGI:MGI:3646222
    See related
    Ensembl:ENSMUSG00000058119 AllianceGenome:MGI:3646222
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm5771; EG436523
    Summary
    Predicted to enable calcium ion binding activity and serine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Human ortholog(s) of this gene implicated in pancreatitis. Orthologous to human PRSS3P2 (PRSS3 pseudogene 2); PRSS1 (serine protease 1); and PRSS2 (serine protease 2). [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Prss1l in Genome Data Viewer
    Location:
    6 B1; 6 19.52 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (41369290..41374190)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (41392356..41397256)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene T cell receptor beta chain Neighboring gene trypsin 10 Neighboring gene STARR-seq mESC enhancer starr_15698 Neighboring gene serine protease 3 Neighboring gene Try10-like trypsinogen pseudogene Neighboring gene serine protease 3 like Neighboring gene serine protease 1 (trypsin 1)

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables calcium ion binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables serine-type endopeptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables serine-type endopeptidase activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in proteolysis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_006980.1 

      Range
      501562..506462
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001038997.2NP_001034086.1  trypsinogen 12 precursor

      See identical proteins and their annotated locations for NP_001034086.1

      Status: VALIDATED

      Source sequence(s)
      AC158659
      Consensus CDS
      CCDS20048.1
      UniProtKB/TrEMBL
      B9EJ35, Q792Y9
      Related
      ENSMUSP00000039684.8, ENSMUST00000049079.9
      Conserved Domains (2) summary
      smart00020
      Location:22238
      Tryp_SPc; Trypsin-like serine protease
      cd00190
      Location:23241
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      41369290..41374190
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)