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    LINC01037 long intergenic non-protein coding RNA 1037 [ Homo sapiens (human) ]

    Gene ID: 106144535, updated on 10-Dec-2024

    Summary

    Official Symbol
    LINC01037provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 1037provided by HGNC
    Primary source
    HGNC:HGNC:49025
    See related
    AllianceGenome:HGNC:49025
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LINC01037 in Genome Data Viewer
    Location:
    1q31.1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (187443628..187477222)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (186798141..186831729)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (187412760..187446354)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1649 Neighboring gene phospholipase A2 group IVA Neighboring gene MPRA-validated peak520 silencer Neighboring gene NANOG hESC enhancer GRCh37_chr1:186954018-186954519 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:187016203-187016870 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2251 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2252 Neighboring gene long intergenic non-protein coding RNA 1036 Neighboring gene uncharacterized LOC105371655 Neighboring gene MPRA-validated peak523 silencer Neighboring gene MPRA-validated peak525 silencer Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:187366310-187367033 Neighboring gene MPRA-validated peak527 silencer Neighboring gene Sharpr-MPRA regulatory region 13721 Neighboring gene uncharacterized LOC105371656 Neighboring gene farnesyl diphosphate synthase pseudogene 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_132374.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL391813, BG182723

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      187443628..187477222
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      186798141..186831729
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)