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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_012548.1 RefSeqGene
- Range
-
4990..46582
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001204466.2 → NP_001191395.1 RNA-binding protein 10 isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an in-frame exon in the coding region, compared to variant 1. The encoded isoform (3) is shorter than isoform 1.
- Source sequence(s)
-
AK292758, AL513366, AW248804, BX537969, DB183041
- Consensus CDS
-
CCDS56600.1
- UniProtKB/TrEMBL
-
Q7Z3D7
- Related
- ENSP00000329659.6, ENST00000345781.10
- Conserved Domains (6) summary
-
- smart00547
Location:138 → 162
- ZnF_RBZ; Zinc finger domain
- sd00029
Location:140 → 159
- zf-RanBP2; RanBP2-type Zn finger [structural motif]
- cd16167
Location:487 → 550
- OCRE_RBM10; OCRE domain found in RNA-binding protein 10 (RBM10) and similar proteins
- pfam01585
Location:781 → 825
- G-patch; G-patch domain
- cd12754
Location:221 → 307
- RRM2_RBM10; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 10 (RBM10)
- cl17169
Location:67 → 134
- RRM_SF; RNA recognition motif (RRM) superfamily
-
NM_001204467.2 → NP_001191396.1 RNA-binding protein 10 isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) uses and alternate splice site in the coding region, compared to variant 1. The encoded isoform (4) is shorter than isoform 1.
- Source sequence(s)
-
AL513366, AW248804, D50912, DB183041
- UniProtKB/TrEMBL
-
Q7Z3D7
- Conserved Domains (7) summary
-
- smart00547
Location:215 → 239
- ZnF_RBZ; Zinc finger domain
- COG0724
Location:21 → 232
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd12753
Location:127 → 211
- RRM1_RBM10; RNA recognition motif 1 in vertebrate RNA-binding protein 10 (RBM10)
- cd12754
Location:298 → 383
- RRM2_RBM10; RNA recognition motif 2 in vertebrate RNA-binding protein 10 (RBM10)
- sd00029
Location:217 → 236
- zf-RanBP2; RanBP2-type Zn finger [structural motif]
- cd16167
Location:563 → 626
- OCRE_RBM10; OCRE domain found in RNA-binding protein 10 (RBM10) and similar proteins
- pfam01585
Location:857 → 899
- G-patch; G-patch domain
-
NM_001204468.2 → NP_001191397.1 RNA-binding protein 10 isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) uses an alternate splice site in the 5' coding region and initiates translation at an upstream in-frame start codon, compared to variant 1. The encoded isoform (5) has a distinct N-terminus and is longer than isoform 1.
- Source sequence(s)
-
AL513366, AW248804, BX537969, DB183041
- Consensus CDS
-
CCDS75969.1
- UniProtKB/TrEMBL
-
Q7Z3D7
- Related
- ENSP00000328848.8, ENST00000329236.8
- Conserved Domains (8) summary
-
- smart00547
Location:280 → 304
- ZnF_RBZ; Zinc finger domain
- COG0724
Location:86 → 297
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd12753
Location:192 → 276
- RRM1_RBM10; RNA recognition motif 1 in vertebrate RNA-binding protein 10 (RBM10)
- cd12754
Location:363 → 449
- RRM2_RBM10; RNA recognition motif 2 in vertebrate RNA-binding protein 10 (RBM10)
- TIGR01661
Location:201 → 446
- ELAV_HUD_SF; ELAV/HuD family splicing factor
- sd00025
Location:282 → 301
- zf-RanBP2; RanBP2-type Zn finger [structural motif]
- pfam01585
Location:923 → 967
- G-patch; G-patch domain
- cd16167
Location:629 → 692
- OCRE_RBM10; OCRE domain found in RNA-binding protein 10 (RBM10) and similar proteins
-
NM_005676.5 → NP_005667.2 RNA-binding protein 10 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes isoform (1).
- Source sequence(s)
-
AW248804, BC008733, DB183041
- Consensus CDS
-
CCDS14274.1
- UniProtKB/Swiss-Prot
- A0A0A0MR66, C4AM81, P98175, Q14136, Q5JRR2, Q9BTE4, Q9BTX0, Q9NTB1
- UniProtKB/TrEMBL
- A0A0S2Z4W4, Q7Z3D7
- Related
- ENSP00000366829.3, ENST00000377604.8
- Conserved Domains (7) summary
-
- smart00547
Location:215 → 239
- ZnF_RBZ; Zinc finger domain
- COG0724
Location:21 → 232
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- sd00029
Location:217 → 236
- zf-RanBP2; RanBP2-type Zn finger [structural motif]
- cd16167
Location:564 → 627
- OCRE_RBM10; OCRE domain found in RNA-binding protein 10 (RBM10) and similar proteins
- pfam01585
Location:858 → 902
- G-patch; G-patch domain
- cd12753
Location:128 → 211
- RRM1_RBM10; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 10 (RBM10)
- cd12754
Location:298 → 384
- RRM2_RBM10; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 10 (RBM10)
-
NM_152856.3 → NP_690595.1 RNA-binding protein 10 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an in-frame exon and uses and alternate splice site in the coding region, compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
BC003089, DB183041
- Consensus CDS
-
CCDS78478.1
- UniProtKB/TrEMBL
- A0A0S2Z4X1, Q7Z3D7
- Related
- ENSP00000486115.1, ENST00000628161.2
- Conserved Domains (6) summary
-
- smart00547
Location:138 → 162
- ZnF_RBZ; Zinc finger domain
- sd00029
Location:140 → 159
- zf-RanBP2; RanBP2-type Zn finger [structural motif]
- cd16167
Location:486 → 549
- OCRE_RBM10; OCRE domain found in RNA-binding protein 10 (RBM10) and similar proteins
- pfam01585
Location:780 → 824
- G-patch; G-patch domain
- cd12754
Location:221 → 306
- RRM2_RBM10; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 10 (RBM10)
- cl17169
Location:67 → 134
- RRM_SF; RNA recognition motif (RRM) superfamily